RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 FGBP02675 491 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 HOXC6P09630 235 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 PTPREP23469 700 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
SMAD1-216ENST00000515527 CASP7P55210 303 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 GTF3C2Q8WUA4 911 aaPredicted RBP16.81■□□□□ 0.28
SMAD1-216ENST00000515527 PRRX2Q99811 253 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 TBX21Q9UL17 535 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 DDTLA6NHG4 134 aaPredicted RBP16.8■□□□□ 0.28
SMAD1-216ENST00000515527 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 ENTPD3O75355 529 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 CCNA1P78396 465 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 MTMR2Q13614 643 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 IER5LQ5T953 404 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 PPP1R12CQ9BZL4 782 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
SMAD1-216ENST00000515527 SMCHD1A6NHR9 2005 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 IL9P15248 144 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 RNF180Q86T96 592 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 OSBPL5Q9H0X9 879 aaPredicted RBP16.79■□□□□ 0.28
SMAD1-216ENST00000515527 IL23AQ9NPF7 189 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 XPNPEP3Q9NQH7 507 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 CHD8Q9HCK8 2581 aa16.79■□□□□ 0.28
SMAD1-216ENST00000515527 EPOPA6NHQ4 379 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 RGS20O76081 388 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 TCF15Q12870 199 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 DPP9Q86TI2 863 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 COL26A1Q96A83 441 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 UBE2ZQ9H832 354 aaPredicted RBP16.78■□□□□ 0.28
SMAD1-216ENST00000515527 STARD7Q9NQZ5 370 aa16.78■□□□□ 0.28
SMAD1-216ENST00000515527 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
SMAD1-216ENST00000515527 GRB14Q14449 540 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 PRAMEF19Q5SWL8 479 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 SLC4A7Q9Y6M7 1214 aa16.77■□□□□ 0.28
SMAD1-216ENST00000515527 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 GAKO14976 1311 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 FAM186AA6NE01 2351 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 PGK1P00558 417 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 CA3P07451 260 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 RARBP10826 455 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 FOXO4P98177 505 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
SMAD1-216ENST00000515527 RABGAP1Q9Y3P9 1069 aa16.76■□□□□ 0.27
SMAD1-216ENST00000515527 IGHA2P01877 340 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 KCNA5P22460 613 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 BACE1P56817 501 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 PICALMQ13492 652 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
SMAD1-216ENST00000515527 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
SMAD1-216ENST00000515527 CACNA1HO95180 2353 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 ZNF536O15090 1300 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 CAP2P40123 477 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
SMAD1-216ENST00000515527 MBIPQ9NS73 344 aa16.74■□□□□ 0.27
SMAD1-216ENST00000515527 TPRP12270 2363 aaKnown RBP16.74■□□□□ 0.27
SMAD1-216ENST00000515527 MED19A0JLT2 244 aaPredicted RBP16.73■□□□□ 0.27
SMAD1-216ENST00000515527 SOWAHBA6NEL2 793 aa16.73■□□□□ 0.27
SMAD1-216ENST00000515527 TBC1D12O60347 775 aa16.73■□□□□ 0.27
SMAD1-216ENST00000515527 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
SMAD1-216ENST00000515527 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
SMAD1-216ENST00000515527 CYP2C18P33260 490 aa16.73■□□□□ 0.27
SMAD1-216ENST00000515527 GRB10Q13322 594 aa16.73■□□□□ 0.27
SMAD1-216ENST00000515527 CNMDO75829 334 aa16.72■□□□□ 0.27
SMAD1-216ENST00000515527 PRDX5P30044 214 aa16.72■□□□□ 0.27
SMAD1-216ENST00000515527 WDR18Q9BV38 432 aa16.72■□□□□ 0.27
SMAD1-216ENST00000515527 PUS3Q9BZE2 481 aaKnown RBP16.72■□□□□ 0.27
SMAD1-216ENST00000515527 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
SMAD1-216ENST00000515527 TECTAO75443 2155 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 ADORA2AP29274 412 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 ACLYP53396 1101 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 CNTNAP3BQ96NU0 1288 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 CNTNAP3Q9BZ76 1288 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 UPF3BQ9BZI7 483 aaKnown RBP16.71■□□□□ 0.27
SMAD1-216ENST00000515527 IRF2BPLQ9H1B7 796 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 ZFHX4Q86UP3 3567 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 PLXNA3P51805 1871 aa16.71■□□□□ 0.27
SMAD1-216ENST00000515527 ATRXP46100 2492 aa16.71■□□□□ 0.26
SMAD1-216ENST00000515527 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
SMAD1-216ENST00000515527 GRXCR2A6NFK2 248 aa16.7■□□□□ 0.26
SMAD1-216ENST00000515527 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
SMAD1-216ENST00000515527 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
SMAD1-216ENST00000515527 SUGP1Q8IWZ8 645 aaKnown RBP16.7■□□□□ 0.26
SMAD1-216ENST00000515527 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms