RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SNF8-214ENST00000515174 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 SMIM22K7EJ46 135 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 SLC34A2O95436 690 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 YEATS4O95619 227 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 CYP2D6P10635 497 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 GNAQP50148 359 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 KRT40Q6A162 431 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 NEDD1Q8NHV4 660 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 TTF2Q9UNY4 1162 aaKnown RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 MORC2Q9Y6X9 1032 aaPredicted RBP11.84□□□□□ -0.51
SNF8-214ENST00000515174 FLT1P17948 1338 aa11.84□□□□□ -0.51
SNF8-214ENST00000515174 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 TSPY2A6NKD2 308 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 YDJCA8MPS7 323 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 DTNBO60941 627 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNF8-214ENST00000515174 RASA1P20936 1047 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 KIF5BP33176 963 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 NASPP49321 788 aaPredicted RBP11.83□□□□□ -0.52
SNF8-214ENST00000515174 CDK8P49336 464 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 TFAP4Q01664 338 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 GABPAQ06546 454 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 TRIM29Q14134 588 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 APOBEC3HQ6NTF7 200 aaKnown RBP11.83□□□□□ -0.52
SNF8-214ENST00000515174 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
SNF8-214ENST00000515174 TAF1DQ9H5J8 278 aaPredicted RBP11.83□□□□□ -0.52
SNF8-214ENST00000515174 MKNK2Q9HBH9 465 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
SNF8-214ENST00000515174 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 SERPINA10Q9UK55 444 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 LTBP3Q9NS15 1303 aa11.83□□□□□ -0.52
SNF8-214ENST00000515174 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 PRDM1O75626 825 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
SNF8-214ENST00000515174 XBP1P17861 261 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 MMP14P50281 582 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 PLCD1P51178 756 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 DEFB115Q30KQ5 88 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 LARGE2Q8N3Y3 721 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 PGBD1Q96JS3 809 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 USP28Q96RU2 1077 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 LZTS2Q9BRK4 669 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 IDI2Q9BXS1 227 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 EHD4Q9H223 541 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 IL17RBQ9NRM6 502 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
SNF8-214ENST00000515174 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 ABT1Q9ULW3 272 aaKnown RBP11.82□□□□□ -0.52
SNF8-214ENST00000515174 PASKQ96RG2 1323 aa11.82□□□□□ -0.52
SNF8-214ENST00000515174 PLIN4Q96Q06 1357 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 CCDC85CA6NKD9 419 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 MMP1P03956 469 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 RXRAP19793 462 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 AKAP17AQ02040 695 aaKnown RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNF8-214ENST00000515174 ADALQ6DHV7 355 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 PHKBQ93100 1093 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNF8-214ENST00000515174 DHX36Q9H2U1 1008 aaKnown RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
SNF8-214ENST00000515174 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 HACL1Q9UJ83 578 aa11.81□□□□□ -0.52
SNF8-214ENST00000515174 PPP6R2O75170 966 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
SNF8-214ENST00000515174 CRKP46108 304 aa11.8□□□□□ -0.52
SNF8-214ENST00000515174 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms