RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GREM2Q9H772 168 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 TBC1D7Q9P0N9 293 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 PSMC1P62191 440 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 TADA2BQ86TJ2 420 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 MTRQ99707 1265 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 APOBRQ0VD83 1088 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 SFMBT2Q5VUG0 894 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 ABCF2Q9UG63 623 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 V9GYY5 206 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 AP5Z1O43299 807 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 STARD3NLO95772 234 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 GPTP24298 496 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 ACTN2P35609 894 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 PDE6BP35913 854 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 SESN3P58005 492 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 SYNE3Q6ZMZ3 975 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 FBXL16Q8N461 479 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 NEK9Q8TD19 979 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 LEO1Q8WVC0 666 aaPredicted RBP8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 PGBD1Q96JS3 809 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 TRIM7Q9C029 511 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 WDR70Q9NW82 654 aa8.46□□□□□ -1.05
PDLIM5-219ENST00000514743 TIAM2Q8IVF5 1701 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 A0A1B0GUA9 196 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 ANKRD65E5RJM6 399 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 MYO1BO43795 1136 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 ITGA6P23229 1130 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 MCAMP43121 646 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 ZAP70P43403 619 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 CDR1P51861 262 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 IFIT5Q13325 482 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 PDIA5Q14554 519 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 CAMK4Q16566 473 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 TTC39AQ5SRH9 613 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 DDX11Q96FC9 970 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 LLPHQ9BRT6 129 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 PUS7LQ9H0K6 701 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 MCM8Q9UJA3 840 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
PDLIM5-219ENST00000514743 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 ADCY5O95622 1261 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 CTSWP56202 376 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 EVCP57679 992 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 CACTIN-AS1Q8N1I8 211 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 B4GALNT2Q8NHY0 566 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 MMADHCQ9H3L0 296 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 SPATA7Q9P0W8 599 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 TPX2Q9ULW0 747 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 TAF1P21675 1872 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 HNRNPH1P31943 449 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 LAMB3Q13751 1172 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 RRP12Q5JTH9 1297 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 ANKRD13AQ8IZ07 590 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 FAM81BQ96LP2 452 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 PTPDC1A2A3K4 754 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 KIF2AO00139 706 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 PDIA3P30101 505 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 TRPC1P48995 793 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 CLNS1AP54105 237 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 DHRS1Q96LJ7 313 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 SCAND2PQ9GZW5 306 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 NCOA5Q9HCD5 579 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 GPHNQ9NQX3 736 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 UBAP1Q9NZ09 502 aa8.45□□□□□ -1.06
PDLIM5-219ENST00000514743 FRMD3A2A2Y4 597 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ZNF34Q8IZ26 560 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ZNF512BQ96KM6 892 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 SPATA32Q96LK8 384 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 TIMM44O43615 452 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 FGAP02671 866 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ZFYP08048 801 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 CYP11B2P19099 503 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ANTXR2P58335 489 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 IRF5Q13568 498 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 ELF2Q15723 593 aa8.44□□□□□ -1.06
PDLIM5-219ENST00000514743 APPBP2Q92624 585 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms