RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 ZCCHC17Q9NP64 241 aaKnown RBP16.6■□□□□ 0.25
USP46-209ENST00000514536 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 GPR25O00155 361 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 PDE4BQ07343 736 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 HAND2P61296 217 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
USP46-209ENST00000514536 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
USP46-209ENST00000514536 FEZ1Q99689 392 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
USP46-209ENST00000514536 RAD50Q92878 1312 aa16.58■□□□□ 0.25
USP46-209ENST00000514536 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
USP46-209ENST00000514536 SIAH1Q8IUQ4 282 aa16.58■□□□□ 0.24
USP46-209ENST00000514536 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.58■□□□□ 0.24
USP46-209ENST00000514536 SGSM2O43147 1006 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 CYP2C8P10632 490 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 ICA1Q05084 483 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
USP46-209ENST00000514536 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
USP46-209ENST00000514536 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 ATAD5Q96QE3 1844 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 ZMYM6O95789 1325 aa16.57■□□□□ 0.24
USP46-209ENST00000514536 TLR2O60603 784 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 USP14P54578 494 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 TFAP4Q01664 338 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 PTH1RQ03431 593 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 NOM1Q5C9Z4 860 aaKnown RBP16.56■□□□□ 0.24
USP46-209ENST00000514536 PARK7Q99497 189 aaKnown RBP16.56■□□□□ 0.24
USP46-209ENST00000514536 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 SLC45A1Q9Y2W3 748 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 LAMB1P07942 1786 aa16.56■□□□□ 0.24
USP46-209ENST00000514536 ZNF213O14771 459 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 FKTNO75072 461 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 EEF2P13639 858 aaKnown RBP16.55■□□□□ 0.24
USP46-209ENST00000514536 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 FGRP09769 529 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 PABPC4Q13310 644 aaKnown RBP eCLIP16.55■□□□□ 0.24
USP46-209ENST00000514536 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
USP46-209ENST00000514536 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 CPA4Q9UI42 421 aa16.55■□□□□ 0.24
USP46-209ENST00000514536 ORC4O43929 436 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 RANBP6O60518 1105 aaKnown RBP16.54■□□□□ 0.24
USP46-209ENST00000514536 OSBPP22059 807 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 ESYT1Q9BSJ8 1104 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
USP46-209ENST00000514536 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 TSPY2A6NKD2 308 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 HOXA7P31268 230 aaPredicted RBP16.53■□□□□ 0.24
USP46-209ENST00000514536 SP3Q02447 781 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
USP46-209ENST00000514536 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 C17orf99Q6UX52 265 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 KIAA1211Q6ZU35 1233 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 TBC1D10CQ8IV04 446 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 STAG1Q8WVM7 1258 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
USP46-209ENST00000514536 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
USP46-209ENST00000514536 CDC45O75419 566 aa16.52■□□□□ 0.24
USP46-209ENST00000514536 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
USP46-209ENST00000514536 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.24
USP46-209ENST00000514536 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
USP46-209ENST00000514536 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
USP46-209ENST00000514536 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
USP46-209ENST00000514536 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 RAD21O60216 631 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 VCAM1P19320 739 aa16.51■□□□□ 0.23
USP46-209ENST00000514536 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms