RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 DNAJC18Q9H819 358 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 MYH1P12882 1939 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP14P54578 494 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 PPP4CP60510 307 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
DDR1-276ENST00000514534 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 FEZ1Q99689 392 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 FLT1P17948 1338 aa12.51□□□□□ -0.41
DDR1-276ENST00000514534 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 GNAI3P08754 354 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 MCAMP43121 646 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 JAG1P78504 1218 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 MTX1Q13505 466 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 GRB14Q14449 540 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 SHHQ15465 462 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 MEIS3Q99687 375 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
DDR1-276ENST00000514534 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 PALD1Q9ULE6 856 aa12.5□□□□□ -0.41
DDR1-276ENST00000514534 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 CNMDO75829 334 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
DDR1-276ENST00000514534 FOSL2P15408 326 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 SLFN5Q08AF3 891 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 SLC39A5Q6ZMH5 540 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 MYLIPQ8WY64 445 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
DDR1-276ENST00000514534 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
DDR1-276ENST00000514534 MYO5AQ9Y4I1 1855 aaKnown RBP12.48□□□□□ -0.41
DDR1-276ENST00000514534 GH2P01242 217 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 CYBAP13498 195 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 CYP2C19P33261 490 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-276ENST00000514534 SNX17Q15036 470 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 ZYXQ15942 572 aaKnown RBP12.48□□□□□ -0.41
DDR1-276ENST00000514534 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
DDR1-276ENST00000514534 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 C9orf50Q5SZB4 431 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
DDR1-276ENST00000514534 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 DPP9Q86TI2 863 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 CERS3Q8IU89 383 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 BADQ92934 168 aa12.48□□□□□ -0.41
DDR1-276ENST00000514534 STRNO43815 780 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 VCAM1P19320 739 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 KIAA1683Q9H0B3 1180 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
DDR1-276ENST00000514534 CABP5Q9NP86 173 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
DDR1-276ENST00000514534 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
DDR1-276ENST00000514534 SEPT4O43236 478 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 TRIM60Q495X7 471 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 TATDN1Q6P1N9 297 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 TRPV1Q8NER1 839 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 EHD4Q9H223 541 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 PDLIM7Q9NR12 457 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
DDR1-276ENST00000514534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
DDR1-276ENST00000514534 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
DDR1-276ENST00000514534 IGHA2P01877 340 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 ADORA2AP29274 412 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 USP5P45974 858 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
DDR1-276ENST00000514534 TJAP1Q5JTD0 557 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 ADGRA1Q86SQ6 560 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
DDR1-276ENST00000514534 RPAP3Q9H6T3 665 aaPredicted RBP12.45□□□□□ -0.42
DDR1-276ENST00000514534 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
DDR1-276ENST00000514534 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
DDR1-276ENST00000514534 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
DDR1-276ENST00000514534 ANO1Q5XXA6 986 aa12.44□□□□□ -0.42
DDR1-276ENST00000514534 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
DDR1-276ENST00000514534 HOXC10Q9NYD6 342 aa12.44□□□□□ -0.42
DDR1-276ENST00000514534 ZNFX1Q9P2E3 1918 aaKnown RBP12.44□□□□□ -0.42
DDR1-276ENST00000514534 A0A0G2JMZ2 1700 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 GNAI2P04899 355 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 CLTBP09497 229 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 CYP7A1P22680 504 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 DYNLL1P63167 89 aaKnown RBP12.43□□□□□ -0.42
DDR1-276ENST00000514534 COG2Q14746 738 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 LRRC41Q15345 812 aa12.43□□□□□ -0.42
DDR1-276ENST00000514534 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms