RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 USP17L15C9J2P7 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L13C9JLJ4 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L11C9JVI0 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L18D6R9N7 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L22D6RA61 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L17D6RBQ6 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L19D6RCP7 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L20D6RJB6 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 PEX10O60683 326 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 INHAP05111 366 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 ELNP15502 786 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 GJA8P48165 433 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 USP17L24Q0WX57 530 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 GPRC5AQ8NFJ5 357 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 DYNLL2Q96FJ2 89 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 UNC93B1Q9H1C4 597 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 GJD2Q9UKL4 321 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
HMGXB3-205ENST00000514469 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 CNMDO75829 334 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 GJB1P08034 283 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 ERVK-24P63145 666 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 CATSPERGQ6ZRH7 1159 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 APPBP2Q92624 585 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 RNF208Q9H0X6 261 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 ARPP21Q9UBL0 812 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
HMGXB3-205ENST00000514469 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 USP17L21D6R901 530 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 HMGCRP04035 888 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 AKR1B1P15121 316 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 MAPK4P31152 587 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 CDK8P49336 464 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 UBE2Q1Q7Z7E8 422 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 U2AF1L4Q8WU68 220 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 SOCS4Q8WXH5 440 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 STRBPQ96SI9 672 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 PAK6Q9NQU5 681 aaPredicted RBP12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
HMGXB3-205ENST00000514469 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 ERC2O15083 957 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 MX1P20591 662 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 ICA1Q05084 483 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 Q3C1V9 767 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 USP6NLQ92738 828 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 PORCNQ9H237 461 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 MYH8P13535 1937 aa12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
HMGXB3-205ENST00000514469 M0R2C6 588 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 GPAA1O43292 621 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 GLRX3O76003 335 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 HDAC1Q13547 482 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 MORN1Q5T089 497 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 GPR142Q7Z601 462 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 TRIB2Q92519 343 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 EPB41L4AQ9HCS5 686 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
HMGXB3-205ENST00000514469 ZNF236Q9UL36 1845 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 SGPL1O95470 568 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 XRCC5P13010 732 aaKnown RBP12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 CAPN2P17655 700 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 GNAT2P19087 354 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 CCNA1P78396 465 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 TRIM32Q13049 653 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms