RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ZNF589Q86UQ0 364 aaPredicted RBP9.88□□□□□ -0.83
CCL28-204ENST00000514421 SLC44A5Q8NCS7 719 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 RUFY2Q8WXA3 655 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 IL17RAQ96F46 866 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.88□□□□□ -0.83
CCL28-204ENST00000514421 GPR25O00155 361 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 PDHXO00330 501 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 AKR1B1P15121 316 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 GUCY1A2P33402 732 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 USP14P54578 494 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 PABPC4Q13310 644 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCL28-204ENST00000514421 SEPT2Q15019 361 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 TAF1CQ15572 869 aaPredicted RBP9.87□□□□□ -0.83
CCL28-204ENST00000514421 SHROOM1Q2M3G4 852 aaPredicted RBP9.87□□□□□ -0.83
CCL28-204ENST00000514421 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 GADL1Q6ZQY3 521 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
CCL28-204ENST00000514421 SNX21Q969T3 373 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 KIF2CQ99661 725 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 R3HDMLQ9H3Y0 253 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 TMOD4Q9NZQ9 345 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 SLC45A1Q9Y2W3 748 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 MAST2Q6P0Q8 1798 aa9.87□□□□□ -0.83
CCL28-204ENST00000514421 FKTNO75072 461 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 RASA1P20936 1047 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 KCNA4P22459 653 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 HMGCS2P54868 508 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 CRHR2Q13324 411 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 BECN1Q14457 450 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 SIAH1Q8IUQ4 282 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 ACER1Q8TDN7 264 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 DSCC1Q9BVC3 393 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 KANSL2Q9H9L4 492 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 CTNNA3Q9UI47 895 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 AGTPBP1Q9UPW5 1226 aa9.86□□□□□ -0.83
CCL28-204ENST00000514421 ZNF213O14771 459 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 TLR2O60603 784 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 PRDM1O75626 825 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 FGRP09769 529 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 OSBPP22059 807 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 HOXA7P31268 230 aaPredicted RBP9.85□□□□□ -0.83
CCL28-204ENST00000514421 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 MTMR2Q13614 643 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 COL13A1Q5TAT6 717 aaPredicted RBP9.85□□□□□ -0.83
CCL28-204ENST00000514421 CASC1Q6TDU7 716 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 IL27Q8NEV9 243 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 NEDD1Q8NHV4 660 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 ZNF296Q8WUU4 475 aaPredicted RBP9.85□□□□□ -0.83
CCL28-204ENST00000514421 PARK7Q99497 189 aaKnown RBP9.85□□□□□ -0.83
CCL28-204ENST00000514421 USP26Q9BXU7 913 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 KIAA1683Q9H0B3 1180 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
CCL28-204ENST00000514421 ZMYM6O95789 1325 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 RAD50Q92878 1312 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 A0A1W2PRG0 241 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 SGSM2O43147 1006 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 REC8O95072 547 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 CYP2C8P10632 490 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 PCP11498 1178 aaKnown RBP9.84□□□□□ -0.83
CCL28-204ENST00000514421 TFAP4Q01664 338 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 SP3Q02447 781 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 ARHGEF6Q15052 776 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 TREML2Q5T2D2 321 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 C17orf99Q6UX52 265 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 MFSD6Q6ZSS7 791 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 FEZ1Q99689 392 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCL28-204ENST00000514421 SH2D4AQ9H788 454 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 INCENPQ9NQS7 918 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 PNMA3Q9UL41 463 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 TMX2Q9Y320 296 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 ROBO3Q96MS0 1386 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 MYH1P12882 1939 aa9.84□□□□□ -0.83
CCL28-204ENST00000514421 USP17L15C9J2P7 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L13C9JLJ4 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L11C9JVI0 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L18D6R9N7 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L22D6RA61 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L17D6RBQ6 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L19D6RCP7 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L20D6RJB6 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 ORC4O43929 436 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 RANBP6O60518 1105 aaKnown RBP9.83□□□□□ -0.84
CCL28-204ENST00000514421 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 EEF2P13639 858 aaKnown RBP9.83□□□□□ -0.84
CCL28-204ENST00000514421 HAND2P61296 217 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 ATP2B2Q01814 1243 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 ICA1Q05084 483 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 USP17L24Q0WX57 530 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 DGKZQ13574 1117 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 FAM47AQ5JRC9 791 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
CCL28-204ENST00000514421 AKNAD1Q5T1N1 836 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms