RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 GRAMD1CQ8IYS0 662 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 CCDC24Q8N4L8 307 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 NOL10Q9BSC4 688 aaKnown RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 HSD3B7Q9H2F3 369 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 DUOX1Q9NRD9 1551 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 CACNA1SQ13698 1873 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 NRDCO43847 1150 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 POSTNQ15063 836 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 NYAP1Q6ZVC0 841 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 DPF2Q92785 391 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 SERTAD1Q9UHV2 236 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
SDHA-216ENST00000514027 FAM205CA6NFA0 338 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 XBP1P17861 261 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 PTPREP23469 700 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
SDHA-216ENST00000514027 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 CNPY4Q8N129 248 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 FAM84BQ96KN1 310 aaPredicted RBP14.34□□□□□ -0.11
SDHA-216ENST00000514027 MYCBPQ99417 103 aaPredicted RBP14.34□□□□□ -0.11
SDHA-216ENST00000514027 RNF26Q9BY78 433 aaPredicted RBP14.34□□□□□ -0.11
SDHA-216ENST00000514027 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 ANAPC4Q9UJX5 808 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
SDHA-216ENST00000514027 SCN7AQ01118 1682 aa14.33□□□□□ -0.11
SDHA-216ENST00000514027 RCAN1P53805 252 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 EVX2Q03828 476 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 PDE4BQ07343 736 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 SF3B3Q15393 1217 aaKnown RBP14.33□□□□□ -0.12
SDHA-216ENST00000514027 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 AATFQ9NY61 560 aaKnown RBP eCLIP14.33□□□□□ -0.12
SDHA-216ENST00000514027 TFCP2L1Q9NZI6 479 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.33□□□□□ -0.12
SDHA-216ENST00000514027 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 CBFA2T2O43439 604 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 BMP6P22004 513 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 MUM1L1Q5H9M0 696 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 ICE2Q659A1 982 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 E4F1Q66K89 784 aaPredicted RBP14.33□□□□□ -0.12
SDHA-216ENST00000514027 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.12
SDHA-216ENST00000514027 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
SDHA-216ENST00000514027 USP17L12C9JPN9 530 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 USP17L21D6R901 530 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 KRT2P35908 639 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 USP49Q70CQ1 688 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 SHISA4Q96DD7 197 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 BRIP1Q9BX63 1249 aa14.32□□□□□ -0.12
SDHA-216ENST00000514027 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 NMT2O60551 498 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 MECOMQ03112 1051 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 PKN1Q16512 942 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 FBXO38Q6PIJ6 1188 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 BARGINQ6ZT62 677 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 PPP1R13BQ96KQ4 1090 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 SRP68Q9UHB9 627 aaKnown RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 NPHP1O15259 732 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 TOP1P11387 765 aaKnown RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 EARS2Q5JPH6 523 aaKnown RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 FAM47AQ5JRC9 791 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 DHX58Q96C10 678 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 ZNF446Q9NWS9 450 aa14.31□□□□□ -0.12
SDHA-216ENST00000514027 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.31□□□□□ -0.12
SDHA-216ENST00000514027 V9GYY5 206 aaPredicted RBP14.31□□□□□ -0.12
SDHA-216ENST00000514027 PRDX5P30044 214 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 NSUN4Q96CB9 384 aaKnown RBP14.3□□□□□ -0.12
SDHA-216ENST00000514027 PHF20Q9BVI0 1012 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 RBM28Q9NW13 759 aaKnown RBP14.3□□□□□ -0.12
SDHA-216ENST00000514027 CASQ1P31415 396 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
SDHA-216ENST00000514027 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 BRMS1Q9HCU9 246 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 NFE2L3Q9Y4A8 694 aa14.3□□□□□ -0.12
SDHA-216ENST00000514027 PRPF3O43395 683 aaKnown RBP14.29□□□□□ -0.12
SDHA-216ENST00000514027 ACTN4O43707 911 aaKnown RBP14.29□□□□□ -0.12
SDHA-216ENST00000514027 CYP2D6P10635 497 aa14.29□□□□□ -0.12
SDHA-216ENST00000514027 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms