RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RANBP6O60518 1105 aaKnown RBP11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 NMT2O60551 498 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 SEC24BO95487 1268 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 ASNSP08243 561 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 ECE1P42892 770 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 PDE4BQ07343 736 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 PPIL2Q13356 520 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 COL9A3Q14050 684 aaPredicted RBP11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 AKNAD1Q5T1N1 836 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 CREB3L3Q68CJ9 461 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 DNAJC5GQ8N7S2 189 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 CTNNA3Q9UI47 895 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
TOPBP1-209ENST00000513818 MYH4Q9Y623 1939 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 TSPY2A6NKD2 308 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 TFAP4Q01664 338 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 ICA1Q05084 483 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 PPATQ06203 517 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 SPP2Q13103 211 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 MTMR2Q13614 643 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 MFSD6Q6ZSS7 791 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 ZNF444Q8N0Y2 327 aaPredicted RBP11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 FEZ1Q99689 392 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 ZKSCAN3Q9BRR0 538 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 CABP5Q9NP86 173 aa11.61□□□□□ -0.55
TOPBP1-209ENST00000513818 PLIN4Q96Q06 1357 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 E7EWF7 191 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 ORC4O43929 436 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 NOGQ13253 232 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 NECTIN1Q15223 517 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 CCL15Q16663 113 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 GADL1Q6ZQY3 521 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 RASGRP2Q7LDG7 609 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 LRRC47Q8N1G4 583 aaKnown RBP11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 BRI3BPQ8WY22 251 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 AFG3L2Q9Y4W6 797 aa11.6□□□□□ -0.55
TOPBP1-209ENST00000513818 IGKV6D-41A0A0C4DH26 115 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 UNCXA6NJT0 531 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 KDM4AO75164 1064 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 REC8O95072 547 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 FGRP09769 529 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 HMGCS2P54868 508 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 CYB5R4Q7L1T6 521 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 CCDC17Q96LX7 622 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
TOPBP1-209ENST00000513818 A0A0G2JLL6 359 aaPredicted RBP11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 RAD21O60216 631 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 SNAPC2Q13487 334 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 MOGSQ13724 837 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 PRRT2Q7Z6L0 340 aaPredicted RBP11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 PTPN18Q99952 460 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
TOPBP1-209ENST00000513818 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 CPA1P15085 419 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 HSPA4P34932 840 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 GTF2A2P52657 109 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 ANTXR2P58335 489 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 RALYLQ86SE5 291 aaKnown RBP11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 SPICE1Q8N0Z3 855 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 FAM43AQ8N2R8 423 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 ESR2Q92731 530 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 USP26Q9BXU7 913 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
TOPBP1-209ENST00000513818 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms