RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 AGBL3Q8NEM8 1001 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
TPM3-221ENST00000513769 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 MAP3K14Q99558 947 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 STX6O43752 255 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 SYT1P21579 422 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 GJB2P29033 226 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 MCM4P33991 863 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 WTAPQ15007 396 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 TNIP1Q15025 636 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 GRIK5Q16478 980 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 AOC3Q16853 763 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 APOBEC3HQ6NTF7 200 aaKnown RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 FOXP4Q8IVH2 680 aaPredicted RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 TEX11Q8IYF3 940 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 TATDN2Q93075 761 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 IDI2Q9BXS1 227 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 USP40Q9NVE5 1235 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
TPM3-221ENST00000513769 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
TPM3-221ENST00000513769 DAGLAQ9Y4D2 1042 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
TPM3-221ENST00000513769 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 DLEC1Q9Y238 1755 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 IARSP41252 1262 aaKnown RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 CRKP46108 304 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 SCRN1Q12765 414 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 CHST3Q7LGC8 479 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 NECAB1Q8N987 351 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 ZSCAN16Q9H4T2 348 aaPredicted RBP11.55□□□□□ -0.56
TPM3-221ENST00000513769 LY9Q9HBG7 655 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
TPM3-221ENST00000513769 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 CPLX1O14810 134 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 ZBTB43O43298 467 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 LARGE1O95461 756 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 ZSCAN22P10073 491 aaPredicted RBP11.54□□□□□ -0.56
TPM3-221ENST00000513769 SEC23AQ15436 765 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 FKBP1CQ5VVH2 108 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 ATL3Q6DD88 541 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 NIM1KQ8IY84 436 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 FAM184AQ8NB25 1140 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 GMLQ99445 158 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
TPM3-221ENST00000513769 TOMM22Q9NS69 142 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 BRPF3Q9ULD4 1205 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 ZDHHC9Q9Y397 364 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 MYH2Q9UKX2 1941 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
TPM3-221ENST00000513769 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
TPM3-221ENST00000513769 ENTPD3O75355 529 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 BAG4O95429 457 aaKnown RBP11.53□□□□□ -0.56
TPM3-221ENST00000513769 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
TPM3-221ENST00000513769 APLP1P51693 650 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
TPM3-221ENST00000513769 CDC42EP5Q6NZY7 148 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 APOA5Q6Q788 366 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 NUDT18Q6ZVK8 323 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 WASF1Q92558 559 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 LRRC2Q9BYS8 371 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 EHD4Q9H223 541 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
TPM3-221ENST00000513769 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
TPM3-221ENST00000513769 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms