RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 TTBK2Q6IQ55 1244 aa6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 SV2BQ7L1I2 683 aa6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 OXR1Q8N573 874 aa6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 ANKRD24Q8TF21 1146 aa6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 GPATCH2Q9NW75 528 aa6.74□□□□□ -1.33
ATP2C1-220ENST00000513636 HPXP02790 462 aa6.73□□□□□ -1.33
ATP2C1-220ENST00000513636 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
ATP2C1-220ENST00000513636 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
ATP2C1-220ENST00000513636 ARID3AQ99856 593 aa6.73□□□□□ -1.33
ATP2C1-220ENST00000513636 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
ATP2C1-220ENST00000513636 ESR1P03372 595 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 PGRP06401 933 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 PDE4BQ07343 736 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 RETREG2Q8NC44 543 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 DHX38Q92620 1227 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 SLC6A17Q9H1V8 727 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 DUSP13Q9UII6 198 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 KCNH3Q9ULD8 1083 aa6.72□□□□□ -1.33
ATP2C1-220ENST00000513636 LTKP29376 864 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 SLC6A19Q695T7 634 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 ZNF605Q86T29 641 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 RELTQ969Z4 430 aa6.71□□□□□ -1.34
ATP2C1-220ENST00000513636 BMP7P18075 431 aa6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 EGR3Q06889 387 aa6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 DPH2Q9BQC3 489 aaPredicted RBP6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 RNF32Q9H0A6 362 aa6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 C19orf44Q9H6X5 657 aa6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
ATP2C1-220ENST00000513636 FITM1A5D6W6 292 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 SRFP11831 508 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 HOXA5P20719 270 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 PDE6BP35913 854 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 CDK8P49336 464 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 IRF2BP1Q8IU81 584 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 SPPL2CQ8IUH8 684 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 MRPL41Q8IXM3 137 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 GAL3ST3Q96A11 431 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 TMEM87BQ96K49 555 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 FRMD6Q96NE9 622 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 SETDB2Q96T68 719 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 CWC22Q9HCG8 908 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 WWC3Q9ULE0 1092 aa6.69□□□□□ -1.34
ATP2C1-220ENST00000513636 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 DLG4P78352 724 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 ZNF385BQ569K4 471 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 KRTAP9-3Q9BYQ3 159 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 PARD6AQ9NPB6 346 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 TJP2Q9UDY2 1190 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 CEP131Q9UPN4 1083 aa6.68□□□□□ -1.34
ATP2C1-220ENST00000513636 WASH4PA8MWX3 477 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 RFXAPO00287 272 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 SEMA7AO75326 666 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 CHMP4BP1P59074 171 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 SEPT6Q14141 434 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 BAHD1Q8TBE0 780 aaPredicted RBP6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 DUSP15Q9H1R2 295 aaPredicted RBP6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 GNEQ9Y223 722 aaKnown RBP6.67□□□□□ -1.34
ATP2C1-220ENST00000513636 GFRA2O00451 464 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 PEX10O60683 326 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 MCATQ8IVS2 390 aaKnown RBP6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 TMEM151BQ8IW70 566 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 MCOLN1Q9GZU1 580 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 GPR160Q9UJ42 338 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 PCDHB5Q9Y5E4 795 aa6.66□□□□□ -1.34
ATP2C1-220ENST00000513636 ZGLP1P0C6A0 271 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 CHRNEQ04844 493 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 DUSP4Q13115 394 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 SNX17Q15036 470 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 MAP3K11Q16584 847 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 INTS4Q96HW7 963 aaKnown RBP6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 Q96M66 194 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 GPR62Q9BZJ7 368 aa6.65□□□□□ -1.34
ATP2C1-220ENST00000513636 BRD1O95696 1058 aa6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 LDHBP07195 334 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 TNNI2P48788 182 aa6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 CLEC16AQ2KHT3 1053 aa6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 ADAM30Q9UKF2 790 aa6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-220ENST00000513636 TEX51A0A1B0GUA7 166 aa6.63□□□□□ -1.35
ATP2C1-220ENST00000513636 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
ATP2C1-220ENST00000513636 GAB4Q2WGN9 574 aa6.63□□□□□ -1.35
ATP2C1-220ENST00000513636 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
ATP2C1-220ENST00000513636 PPP1R13LQ8WUF5 828 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms