RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CLASRPQ8N2M8 674 aaKnown RBP11.94□□□□□ -0.5
CCL28-203ENST00000513525 ZNF280CQ8ND82 737 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCL28-203ENST00000513525 ANTXR1Q9H6X2 564 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 DNAJC18Q9H819 358 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 IL1RAPL2Q9NP60 686 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 GINM1Q9NU53 330 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 USP17L5A8MUK1 530 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 RAB11FIP3O75154 756 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 ASNSP08243 561 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 OSBPP22059 807 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 PDE4AP27815 886 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 SPP2Q13103 211 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 HDAC1Q13547 482 aaPredicted RBP11.93□□□□□ -0.5
CCL28-203ENST00000513525 TTF1Q15361 905 aaPredicted RBP11.93□□□□□ -0.5
CCL28-203ENST00000513525 MAGEB6Q8N7X4 407 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 AS3MTQ9HBK9 375 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 PNMA3Q9UL41 463 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 PARP14Q460N5 1801 aa11.93□□□□□ -0.5
CCL28-203ENST00000513525 MYPNQ86TC9 1320 aa11.92□□□□□ -0.5
CCL28-203ENST00000513525 FMNL1O95466 1100 aaPredicted RBP11.92□□□□□ -0.5
CCL28-203ENST00000513525 HLA-DOAP06340 250 aa11.92□□□□□ -0.5
CCL28-203ENST00000513525 FCGRTP55899 365 aa11.92□□□□□ -0.5
CCL28-203ENST00000513525 PRPF38BQ5VTL8 546 aaKnown RBP11.92□□□□□ -0.5
CCL28-203ENST00000513525 WDR18Q9BV38 432 aa11.92□□□□□ -0.5
CCL28-203ENST00000513525 PABPC4Q13310 644 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCL28-203ENST00000513525 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 CRACR2BQ8N4Y2 399 aaPredicted RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 SMCR8Q8TEV9 937 aaPredicted RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 RIOK1Q9BRS2 568 aaKnown RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 EHD4Q9H223 541 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 EN2P19622 333 aaPredicted RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 GRK4P32298 578 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 USP5P45974 858 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 HMGCS2P54868 508 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 FAM110CQ1W6H9 321 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
CCL28-203ENST00000513525 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
CCL28-203ENST00000513525 RLFQ13129 1914 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 C19orf81C9J6K1 198 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 GCLCP48506 637 aaPredicted RBP11.9□□□□□ -0.5
CCL28-203ENST00000513525 BACE1P56817 501 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 JAG1P78504 1218 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 PRKCZQ05513 592 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
CCL28-203ENST00000513525 FRMPD3Q5JV73 1810 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 APBB1O00213 710 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
CCL28-203ENST00000513525 PDE6AP16499 860 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 ATP5JP18859 108 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 HOXA7P31268 230 aaPredicted RBP11.89□□□□□ -0.51
CCL28-203ENST00000513525 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
CCL28-203ENST00000513525 MTMR2Q13614 643 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 SLC4A8Q2Y0W8 1093 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
CCL28-203ENST00000513525 SERPINB13Q9UIV8 391 aa11.89□□□□□ -0.51
CCL28-203ENST00000513525 ALPK3Q96L96 1907 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 A0A0G2JMZ2 1700 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 CEP290O15078 2479 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 ZNF532Q9HCE3 1301 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 USP17L10C9JJH3 530 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 GOLIM4O00461 696 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 GDF11O95390 407 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 NUDT7P0C024 238 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 IRF5Q13568 498 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 ANKRD13CQ8N6S4 541 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 DNAJC2Q99543 621 aaKnown RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 GABRQQ9UN88 632 aa11.88□□□□□ -0.51
CCL28-203ENST00000513525 ZNFX1Q9P2E3 1918 aaKnown RBP11.88□□□□□ -0.51
CCL28-203ENST00000513525 COL11A1P12107 1806 aaPredicted RBP11.87□□□□□ -0.51
CCL28-203ENST00000513525 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 FLT3LGP49771 235 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 MTFR1Q15390 333 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 PXYLP1Q8TE99 480 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 LRRCC1Q9C099 1032 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 MORF4L1Q9UBU8 362 aa11.87□□□□□ -0.51
CCL28-203ENST00000513525 SLC34A2O95436 690 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 GH2P01242 217 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 ADD2P35612 726 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms