RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 NBPF11Q86T75 865 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 PHACTR4Q8IZ21 702 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNF4-219ENST00000513450 PRDM10Q9NQV6 1147 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 R3HCC1Q9Y3T6 440 aaKnown RBP3.62□□□□□ -1.83
RNF4-219ENST00000513450 A0A1W2PQH9 124 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 HMX2A2RU54 273 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 SMAD7O15105 426 aaKnown RBP3.61□□□□□ -1.83
RNF4-219ENST00000513450 DYNC1LI2O43237 492 aaPredicted RBP3.61□□□□□ -1.83
RNF4-219ENST00000513450 KLF4O43474 513 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 ACRP10323 421 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 ETV3P41162 512 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 CDK5R2Q13319 367 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 CPSF6Q16630 551 aaKnown RBP eCLIP3.61□□□□□ -1.83
RNF4-219ENST00000513450 RNF43Q68DV7 783 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 LETMD1Q6P1Q0 360 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 OGFOD3Q6PK18 319 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 ANKS3Q6ZW76 656 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 ZAR1Q86SH2 424 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 TTC6Q86TZ1 520 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 FAM169BQ8N8A8 192 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 COX4I2Q96KJ9 171 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 DHRS1Q96LJ7 313 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 SLC9A7Q96T83 725 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 DPH2Q9BQC3 489 aaPredicted RBP3.61□□□□□ -1.83
RNF4-219ENST00000513450 DUSP23Q9BVJ7 150 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 PHAXQ9H814 394 aaKnown RBP3.61□□□□□ -1.83
RNF4-219ENST00000513450 LGR6Q9HBX8 967 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 ACTR10Q9NZ32 417 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 CEP131Q9UPN4 1083 aa3.61□□□□□ -1.83
RNF4-219ENST00000513450 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 UBOX5O94941 541 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 SLITRK5O94991 958 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 CYP7A1P22680 504 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 CHMP4BP1P59074 171 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 NFIAQ12857 509 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 RAB33AQ14088 237 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 PPP2R5EQ16537 467 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 CYP27C1Q4G0S4 372 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 NKAPLQ5M9Q1 402 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 UNC5AQ6ZN44 842 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 RUFY4Q6ZNE9 571 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 TOP6BLQ8N6T0 577 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 DNAJB8Q8NHS0 232 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 XAGE3Q8WTP9 111 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 PPP1R13LQ8WUF5 828 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 GATA6Q92908 595 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 TBC1D32Q96NH3 1257 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 DNAJC2Q99543 621 aaKnown RBP3.6□□□□□ -1.83
RNF4-219ENST00000513450 KIF2CQ99661 725 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 MIPEPQ99797 713 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 DBNDD2Q9BQY9 259 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 METTL22Q9BUU2 404 aaPredicted RBP3.6□□□□□ -1.83
RNF4-219ENST00000513450 TRIM55Q9BYV6 548 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 GTF2IRD1Q9UHL9 959 aa3.6□□□□□ -1.83
RNF4-219ENST00000513450 IGF2BP3O00425 579 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNF4-219ENST00000513450 U2SURPO15042 1029 aaKnown RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 IGSF3O75054 1194 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 CLEC3AO75596 197 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 EOMESO95936 686 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 IGLV1-40P01703 118 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 FAM87AP0C7U9 286 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 FSTP19883 344 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 ITGB7P26010 798 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 POLR2BP30876 1174 aaKnown RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 ADMP35318 185 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 RNF4P78317 190 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 ZYXQ15942 572 aaKnown RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 FXNQ16595 210 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 RSPO4Q2I0M5 234 aaPredicted RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 BBS9Q3SYG4 887 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 DUSP27Q5VZP5 1158 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 RIN3Q8TB24 985 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 BAHD1Q8TBE0 780 aaPredicted RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 RNF141Q8WVD5 230 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 HNRNPLLQ8WVV9 542 aaKnown RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 SMARCC1Q92922 1105 aaPredicted RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 MKL1Q969V6 931 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 MFSD14AQ96MC6 490 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 FBXL18Q96ME1 805 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 SLC6A18Q96N87 628 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 TNKS2Q9H2K2 1166 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 ZFP64Q9NPA5 681 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 PRDM5Q9NQX1 630 aaPredicted RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 SIRPGQ9P1W8 387 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 SUCOQ9UBS9 1254 aaKnown RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 ZNF214Q9UL59 606 aaPredicted RBP3.59□□□□□ -1.83
RNF4-219ENST00000513450 MAPK8IP1Q9UQF2 711 aa3.59□□□□□ -1.83
RNF4-219ENST00000513450 DYRK3O43781 588 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 LEFTY1O75610 366 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 F13BP05160 661 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 KIR3DL1P43629 444 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 PMS1P54277 932 aaKnown RBP3.58□□□□□ -1.84
RNF4-219ENST00000513450 NCAPHQ15003 741 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 DDR2Q16832 855 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 C22orf34Q6ZV56 151 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 FAM214BQ7L5A3 538 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 LRP10Q7Z4F1 713 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 TMEM192Q8IY95 271 aa3.58□□□□□ -1.84
RNF4-219ENST00000513450 FBXL6Q8N531 539 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms