RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MAP3K9P80192 1104 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 CTDSPL2Q05D32 466 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 NOL9Q5SY16 702 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 AKNAD1Q5T1N1 836 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 SAPCD2Q86UD0 394 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 SLC44A5Q8NCS7 719 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 DYNLL2Q96FJ2 89 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 CCDC17Q96LX7 622 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 GINM1Q9NU53 330 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 FZD1Q9UP38 647 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 CSADQ9Y600 493 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 TLL2Q9Y6L7 1015 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 ASNSP08243 561 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 SLURP2P0DP57 97 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 RASA1P20936 1047 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 MCCP23508 829 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 INPP5BP32019 993 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 HSPA4P34932 840 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 CAP2P40123 477 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 HUNKP57058 714 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 C1QTNF8P60827 252 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 VGLL4Q14135 290 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 NECTIN1Q15223 517 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 CERKLQ49MI3 558 aaPredicted RBP8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 LDLRAD1Q5T700 205 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 CREB3L3Q68CJ9 461 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 MFSD6Q6ZSS7 791 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 MOB2Q70IA6 237 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 TBC1D10CQ8IV04 446 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 SCYL3Q8IZE3 742 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 STK11IPQ8N1F8 1099 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 HHIPL1Q96JK4 782 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 CNNM2Q9H8M5 875 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 MKNK2Q9HBH9 465 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 ABT1Q9ULW3 272 aaKnown RBP8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 NEDD4P46934 1319 aa8.98□□□□□ -0.97
HMGXB3-204ENST00000513318 SLC27A2O14975 620 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 GDF11O95390 407 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ZKSCAN1P17029 563 aaPredicted RBP8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 TRDNQ13061 729 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ABCB5Q2M3G0 1257 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 TMEM179Q6ZVK1 233 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 RALYLQ86SE5 291 aaKnown RBP8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 PLPP6Q8IY26 295 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ZNF444Q8N0Y2 327 aaPredicted RBP8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ESR2Q92731 530 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ZKSCAN4Q969J2 545 aaPredicted RBP8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 TBC1D2Q9BYX2 928 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 KRT23Q9C075 422 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 CABP5Q9NP86 173 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 PICK1Q9NRD5 415 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 TOMM22Q9NS69 142 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 ZBTB21Q9ULJ3 1066 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 SNCAIPQ9Y6H5 919 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 RLFQ13129 1914 aa8.97□□□□□ -0.97
HMGXB3-204ENST00000513318 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 TSPY2A6NKD2 308 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 E7EWF7 191 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 UBE2Q2LH0YL09 131 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 MPHOSPH10O00566 681 aaKnown RBP8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 PRDM1O75626 825 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 GH2P01242 217 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 TSPY3P0CV98 308 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 TSPY8P0CW00 308 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 AKR1B1P15121 316 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 HSPA6P17066 643 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 KRT32Q14532 448 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 RRP1BQ14684 758 aaKnown RBP8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 TSGA10IPQ3SY00 556 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 RRP12Q5JTH9 1297 aaKnown RBP8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 RGMBQ6NW40 437 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 ERO1BQ86YB8 467 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 NCOA7Q8NI08 942 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 KCNB2Q92953 911 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 UPF2Q9HAU5 1272 aaKnown RBP8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 AS3MTQ9HBK9 375 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 TACC3Q9Y6A5 838 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 MGAMO43451 1857 aa8.96□□□□□ -0.98
HMGXB3-204ENST00000513318 BAZ2BQ9UIF8 2168 aaKnown RBP8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 RASSF10A6NK89 507 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 USP17L5A8MUK1 530 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 B4E1Z4 1266 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 SLC10A3P09131 477 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 ZBTB48P10074 688 aaPredicted RBP8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 PTPRAP18433 802 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 PPATQ06203 517 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 PPP4R3BQ5MIZ7 849 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 STOX1Q6ZVD7 989 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 IQCA1Q86XH1 822 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 RASAL3Q86YV0 1011 aa8.95□□□□□ -0.98
HMGXB3-204ENST00000513318 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms