RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 CYP7A1P22680 504 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 ETV3P41162 512 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 SOX9P48436 509 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 NKPD1Q17RQ9 610 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 SFRP5Q5T4F7 317 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 CNNM2Q9H8M5 875 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 GINM1Q9NU53 330 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 RGS13O14921 159 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 ADAMTS4O75173 837 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 IFI16Q16666 785 aaKnown RBP7.48□□□□□ -1.21
CHD1-210ENST00000513064 ARSHQ5FYA8 562 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 OVOS1Q6IE37 1185 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 ARHGAP27Q6ZUM4 889 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 SPACA3Q8IXA5 215 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 TMEM40Q8WWA1 233 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 ATG4CQ96DT6 458 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 ANTXR1Q9H6X2 564 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 EFR3BQ9Y2G0 817 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 INPP5FQ9Y2H2 1132 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
CHD1-210ENST00000513064 COL17A1Q9UMD9 1497 aaPredicted RBP7.48□□□□□ -1.21
CHD1-210ENST00000513064 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 PRR33A8MZF0 331 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 WNT11O96014 354 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 RAG1P15918 1043 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 NLRC3Q7RTR2 1065 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 PHACTR4Q8IZ21 702 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 RBBP8NLQ8NC74 664 aaPredicted RBP7.47□□□□□ -1.21
CHD1-210ENST00000513064 BAHD1Q8TBE0 780 aaPredicted RBP7.47□□□□□ -1.21
CHD1-210ENST00000513064 MISP3Q96FF7 219 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 KIF2CQ99661 725 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 PPT2Q9UMR5 302 aa7.47□□□□□ -1.21
CHD1-210ENST00000513064 ITIH2P19823 946 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 KIR3DL1P43629 444 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 TNNI2P48788 182 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 NFXL1Q6ZNB6 911 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 VSIG10LQ86VR7 867 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 MFSD4AQ8N468 514 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
CHD1-210ENST00000513064 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 FERD3LQ96RJ6 166 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 VAV3Q9UKW4 847 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 CAPN6Q9Y6Q1 641 aa7.46□□□□□ -1.22
CHD1-210ENST00000513064 UBOX5O94941 541 aa7.45□□□□□ -1.22
CHD1-210ENST00000513064 NME1P15531 152 aaKnown RBP7.45□□□□□ -1.22
CHD1-210ENST00000513064 CCNFP41002 786 aa7.45□□□□□ -1.22
CHD1-210ENST00000513064 CLCN7P51798 805 aa7.45□□□□□ -1.22
CHD1-210ENST00000513064 PRKCQQ04759 706 aa7.45□□□□□ -1.22
CHD1-210ENST00000513064 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
CHD1-210ENST00000513064 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
CHD1-210ENST00000513064 LOC100996750A0A140TA64 210 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
CHD1-210ENST00000513064 TNFRSF10CO14798 259 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 CBX7O95931 251 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 GBP1P32455 592 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 PIWIL2Q8TC59 973 aaKnown RBP7.44□□□□□ -1.22
CHD1-210ENST00000513064 RNF141Q8WVD5 230 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 VWCEQ96DN2 955 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 FBXL18Q96ME1 805 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 KREMEN1Q96MU8 473 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 KRTAP4-6Q9BYQ5 205 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHD1-210ENST00000513064 ANGEL1Q9UNK9 670 aaKnown RBP7.44□□□□□ -1.22
CHD1-210ENST00000513064 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
CHD1-210ENST00000513064 RBAK-RBAKDNI3L0D1 243 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 POLR2BP30876 1174 aaKnown RBP7.43□□□□□ -1.22
CHD1-210ENST00000513064 NASPP49321 788 aaPredicted RBP7.43□□□□□ -1.22
CHD1-210ENST00000513064 TNK2Q07912 1038 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 AOC3Q16853 763 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 WFDC3Q8IUB2 231 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
CHD1-210ENST00000513064 HRASLS5Q96KN8 279 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 Q96M66 194 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 TM9SF2Q99805 663 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 ASPNQ9BXN1 380 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 ST14Q9Y5Y6 855 aa7.43□□□□□ -1.22
CHD1-210ENST00000513064 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
CHD1-210ENST00000513064 BNIP3Q12983 259 aa7.42□□□□□ -1.22
CHD1-210ENST00000513064 FBXW10Q5XX13 1052 aa7.42□□□□□ -1.22
CHD1-210ENST00000513064 SPRED2Q7Z698 418 aa7.42□□□□□ -1.22
CHD1-210ENST00000513064 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
CHD1-210ENST00000513064 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
CHD1-210ENST00000513064 PAK6Q9NQU5 681 aaPredicted RBP7.42□□□□□ -1.22
CHD1-210ENST00000513064 ACRP10323 421 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 GIPRP48546 466 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
CHD1-210ENST00000513064 CCDC81Q6ZN84 652 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 NBPF11Q86T75 865 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 HSPA12BQ96MM6 686 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
CHD1-210ENST00000513064 CAPN10Q9HC96 672 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 SEMA3GQ9NS98 782 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 PITPNM2Q9BZ72 1349 aa7.41□□□□□ -1.22
CHD1-210ENST00000513064 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms