RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.96□□□□□ -0.65
DHFR-206ENST00000513048 ERICH2A1L162 156 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 ZBTB43O43298 467 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 TBC1D12O60347 775 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 RXRAP19793 462 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 GJB2P29033 226 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 CDC27P30260 824 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 JAG1P78504 1218 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 TROAPQ12815 778 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 PKP1Q13835 747 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 RASA3Q14644 834 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 NTRK3Q16288 839 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
DHFR-206ENST00000513048 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 IFIT1BQ5T764 474 aaKnown RBP10.95□□□□□ -0.66
DHFR-206ENST00000513048 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 ZSCAN29Q8IWY8 852 aaPredicted RBP10.95□□□□□ -0.66
DHFR-206ENST00000513048 CCDC17Q96LX7 622 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 CSRNP1Q96S65 589 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
DHFR-206ENST00000513048 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
DHFR-206ENST00000513048 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 DDAH1O94760 285 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 FDPSP14324 419 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 GUCY1A2P33402 732 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 METAP2P50579 478 aaKnown RBP eCLIP10.94□□□□□ -0.66
DHFR-206ENST00000513048 RAB3GAP1Q15042 981 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 MICU3Q86XE3 530 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 CRACR2BQ8N4Y2 399 aaPredicted RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 TMEM47Q9BQJ4 181 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
DHFR-206ENST00000513048 SCAF8Q9UPN6 1271 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 POLR2AP24928 1970 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
DHFR-206ENST00000513048 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 PTPDC1A2A3K4 754 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 POTECB2RU33 542 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 BRD1O95696 1058 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 TNNI2P48788 182 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 FUT2Q10981 343 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 ANGEL2Q5VTE6 544 aaKnown RBP10.93□□□□□ -0.66
DHFR-206ENST00000513048 CLEC10AQ8IUN9 316 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 SIAH1Q8IUQ4 282 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
DHFR-206ENST00000513048 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 CHMP4CQ96CF2 233 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
DHFR-206ENST00000513048 SCN4AP35499 1836 aa10.93□□□□□ -0.66
DHFR-206ENST00000513048 PITPNM2Q9BZ72 1349 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 CALM1P0DP23 149 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 CALM2P0DP24 149 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 CALM3P0DP25 149 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 TOP1P11387 765 aaKnown RBP10.92□□□□□ -0.66
DHFR-206ENST00000513048 IFNAR1P17181 557 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 SYT1P21579 422 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 NUCB2P80303 420 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 GRM4Q14833 912 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 RTN1Q16799 776 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
DHFR-206ENST00000513048 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
DHFR-206ENST00000513048 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 MAP3K14Q99558 947 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.92□□□□□ -0.662e-6■■□□□ 13.2
DHFR-206ENST00000513048 GGA3Q9NZ52 723 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
DHFR-206ENST00000513048 SSC5DA1L4H1 1573 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 PHF20L1A8MW92 1017 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
DHFR-206ENST00000513048 GDF11O95390 407 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 LMOD1P29536 600 aaPredicted RBP10.91□□□□□ -0.66
DHFR-206ENST00000513048 HMGN5P82970 282 aaKnown RBP10.91□□□□□ -0.66
DHFR-206ENST00000513048 PPP2R5BQ15173 497 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 ABCB5Q2M3G0 1257 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 SLC35G1Q2M3R5 365 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 TMEM179Q6ZVK1 233 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 TMTC3Q6ZXV5 915 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 NUP133Q8WUM0 1156 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 MKL1Q969V6 931 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 MTMR6Q9Y217 621 aa10.91□□□□□ -0.66
DHFR-206ENST00000513048 STK36Q9NRP7 1315 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 STX6O43752 255 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 PLEKHA8P1O95397 391 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms