RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TBC1D32Q96NH3 1257 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 SRPK1Q96SB4 655 aaKnown RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
HTT-210ENST00000512909 ASCC2Q9H1I8 757 aaPredicted RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 SEMA6CQ9H3T2 930 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 ANTXR1Q9H6X2 564 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 FBRSQ9HAH7 460 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 PRDM10Q9NQV6 1147 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 SMARCA2P51531 1590 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 SMARCA4P51532 1647 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 GSC2O15499 205 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 RBL2Q08999 1139 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 GNPTABQ3T906 1256 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 INTS3Q68E01 1043 aaKnown RBP6.22□□□□□ -1.41
HTT-210ENST00000512909 LETMD1Q6P1Q0 360 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 RUFY4Q6ZNE9 571 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 DZIP1LQ8IYY4 767 aaKnown RBP6.22□□□□□ -1.41
HTT-210ENST00000512909 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 MKRN2Q9H000 416 aaKnown RBP6.22□□□□□ -1.41
HTT-210ENST00000512909 PHAXQ9H814 394 aaKnown RBP6.22□□□□□ -1.41
HTT-210ENST00000512909 ST7Q9NRC1 585 aa6.22□□□□□ -1.41
HTT-210ENST00000512909 RGS13O14921 159 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 CAP2P40123 477 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 CASP7P55210 303 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 CDK5R2Q13319 367 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 RAB33AQ14088 237 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 BMS1Q14692 1282 aaKnown RBP6.21□□□□□ -1.42
HTT-210ENST00000512909 NCAPHQ15003 741 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 NKG7Q16617 165 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 VHLLQ6RSH7 139 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 UNC5AQ6ZN44 842 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 CCDC144CPQ8IYA2 1237 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 FBXL6Q8N531 539 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 TAB3Q8N5C8 712 aaPredicted RBP6.21□□□□□ -1.42
HTT-210ENST00000512909 EZH1Q92800 747 aaPredicted RBP6.21□□□□□ -1.42
HTT-210ENST00000512909 PPP1R14AQ96A00 147 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 FAM83CQ9BQN1 747 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 LNPKQ9C0E8 428 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 GTF2IRD1Q9UHL9 959 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 KCNH3Q9ULD8 1083 aa6.21□□□□□ -1.42
HTT-210ENST00000512909 GNAT3A8MTJ3 354 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
HTT-210ENST00000512909 AGRPO00253 132 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 TNFRSF10CO14798 259 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 SLBPQ14493 270 aaKnown RBP eCLIP6.2□□□□□ -1.42
HTT-210ENST00000512909 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 CDH24Q86UP0 819 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 ARMC10Q8N2F6 343 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 BAHD1Q8TBE0 780 aaPredicted RBP6.2□□□□□ -1.42
HTT-210ENST00000512909 SMARCC1Q92922 1105 aaPredicted RBP6.2□□□□□ -1.42
HTT-210ENST00000512909 OSBPL1AQ9BXW6 950 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 PRDM5Q9NQX1 630 aaPredicted RBP6.2□□□□□ -1.42
HTT-210ENST00000512909 FBXL21Q9UKT6 434 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
HTT-210ENST00000512909 NESP48681 1621 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 A0A1W2PQH9 124 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 CLSTN1O94985 981 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 POLR2BP30876 1174 aaKnown RBP6.19□□□□□ -1.42
HTT-210ENST00000512909 CCDC144BQ3MJ40 725 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 ADAT2Q7Z6V5 191 aaKnown RBP6.19□□□□□ -1.42
HTT-210ENST00000512909 COX4I2Q96KJ9 171 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 SLC6A18Q96N87 628 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 SLC9A7Q96T83 725 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 GBP3Q9H0R5 595 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 C7orf69Q9H7B7 122 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 FAM86C1Q9NVL1 165 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 LRP2BPQ9P2M1 347 aa6.19□□□□□ -1.42
HTT-210ENST00000512909 HMX2A2RU54 273 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 NTF4P34130 210 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 GSK3AP49840 483 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 DDR2Q16832 855 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 NOL9Q5SY16 702 aaKnown RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 SFRP5Q5T4F7 317 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 HEATR6Q6AI08 1181 aaKnown RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 KIAA1211LQ6NV74 962 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 PRR23CQ6ZRP0 262 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 UBE3DQ7Z6J8 389 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 FAM169BQ8N8A8 192 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 MAPK8IP1Q9UQF2 711 aa6.18□□□□□ -1.42
HTT-210ENST00000512909 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
HTT-210ENST00000512909 CBX7O95931 251 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 DOC2BQ14184 412 aa6.17□□□□□ -1.42
HTT-210ENST00000512909 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms