RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 CEP131Q9UPN4 1083 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 CBX7O95931 251 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 KIR3DL1P43629 444 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 CD97P48960 835 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 MFSD4AQ8N468 514 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 KIF2CQ99661 725 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 ZC3H7BQ9UGR2 993 aaKnown RBP8.62□□□□□ -1.03
CHD1-209ENST00000512844 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 PPT2Q9UMR5 302 aa8.62□□□□□ -1.03
CHD1-209ENST00000512844 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
CHD1-209ENST00000512844 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
CHD1-209ENST00000512844 NPM2Q86SE8 214 aaKnown RBP8.61□□□□□ -1.03
CHD1-209ENST00000512844 MISP3Q96FF7 219 aa8.61□□□□□ -1.03
CHD1-209ENST00000512844 SEC16BQ96JE7 1060 aa8.61□□□□□ -1.03
CHD1-209ENST00000512844 KCNH3Q9ULD8 1083 aa8.61□□□□□ -1.03
CHD1-209ENST00000512844 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
CHD1-209ENST00000512844 RNF4P78317 190 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 NBPF11Q86T75 865 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 VSIG10LQ86VR7 867 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 PLD6Q8N2A8 252 aaKnown RBP8.6□□□□□ -1.03
CHD1-209ENST00000512844 RIN3Q8TB24 985 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 BAHD1Q8TBE0 780 aaPredicted RBP8.6□□□□□ -1.03
CHD1-209ENST00000512844 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
CHD1-209ENST00000512844 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
CHD1-209ENST00000512844 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHD1-209ENST00000512844 STRIP2Q9ULQ0 834 aa8.6□□□□□ -1.03
CHD1-209ENST00000512844 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 KIAA1324LA8MWY0 1029 aaPredicted RBP8.59□□□□□ -1.03
CHD1-209ENST00000512844 RGS13O14921 159 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 CCNFP41002 786 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 SOX9P48436 509 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 OXCT1P55809 520 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 MSMPQ1L6U9 139 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 CCDC81Q6ZN84 652 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 ATG4CQ96DT6 458 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 CNNM2Q9H8M5 875 aa8.59□□□□□ -1.03
CHD1-209ENST00000512844 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
CHD1-209ENST00000512844 DNAJA2O60884 412 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 WNT11O96014 354 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHD1-209ENST00000512844 CLCN7P51798 805 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 OR6P1Q8NGX9 317 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 DNAJB8Q8NHS0 232 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 TM9SF2Q99805 663 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 ASCC2Q9H1I8 757 aaPredicted RBP8.58□□□□□ -1.04
CHD1-209ENST00000512844 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 SNX11Q9Y5W9 270 aa8.58□□□□□ -1.04
CHD1-209ENST00000512844 CLEC3AO75596 197 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 NME1P15531 152 aaKnown RBP8.57□□□□□ -1.04
CHD1-209ENST00000512844 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
CHD1-209ENST00000512844 CDKAL1Q5VV42 579 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 C22orf34Q6ZV56 151 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 FLCNQ8NFG4 579 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 DHRS1Q96LJ7 313 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 KREMEN1Q96MU8 473 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
CHD1-209ENST00000512844 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
CHD1-209ENST00000512844 SPINK2P20155 84 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 ARID5AQ03989 594 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 FAM214BQ7L5A3 538 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 PIWIL2Q8TC59 973 aaKnown RBP8.56□□□□□ -1.04
CHD1-209ENST00000512844 ASB11Q8WXH4 323 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 FBXL18Q96ME1 805 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.042e-6■■■■□ 23
CHD1-209ENST00000512844 VAV3Q9UKW4 847 aa8.56□□□□□ -1.04
CHD1-209ENST00000512844 MED26O95402 600 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 ATF4P18848 351 aaPredicted RBP8.55□□□□□ -1.04
CHD1-209ENST00000512844 DNAJA1P31689 397 aaKnown RBP8.55□□□□□ -1.04
CHD1-209ENST00000512844 PRKCQQ04759 706 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 AOC3Q16853 763 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 PPP1R13LQ8WUF5 828 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
CHD1-209ENST00000512844 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 SLC12A7Q9Y666 1083 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 CAPN6Q9Y6Q1 641 aa8.55□□□□□ -1.04
CHD1-209ENST00000512844 FAM86C2PA6NEL3 165 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 TNFRSF10CO14798 259 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 PRNPP04156 253 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 GUCY2CP25092 1073 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 POLR2BP30876 1174 aaKnown RBP8.54□□□□□ -1.04
CHD1-209ENST00000512844 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
CHD1-209ENST00000512844 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
CHD1-209ENST00000512844 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 RBBP8NLQ8NC74 664 aaPredicted RBP8.54□□□□□ -1.04
CHD1-209ENST00000512844 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 MKRN2Q9H000 416 aaKnown RBP8.54□□□□□ -1.04
CHD1-209ENST00000512844 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
CHD1-209ENST00000512844 PRR33A8MZF0 331 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 H3BS24 57 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 PPP2R5EQ16537 467 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms