RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 TNIP1Q15025 636 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 PPP4R3BQ5MIZ7 849 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 FKBP1CQ5VVH2 108 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 PNMA1Q8ND90 353 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 PPP1R1BQ9UD71 204 aaPredicted RBP28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 PCDHAC2Q9Y5I4 1007 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 PPFIA3O75145 1194 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 TRIM29Q14134 588 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 KRT40Q6A162 431 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 CIAPIN1Q6FI81 312 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 TMEM47Q9BQJ4 181 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 GDPD2Q9HCC8 539 aa28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 RBM27Q9P2N5 1060 aaKnown RBP28.23■■■□□ 2.11
SPOCK3-221ENST00000512648 FIBPO43427 364 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 TOP1P11387 765 aaKnown RBP28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 SHMT1P34896 483 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 KIF23Q02241 960 aaPredicted RBP28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 GRM4Q14833 912 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 FAM173BQ6P4H8 233 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 SPON1Q9HCB6 807 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 BCS1LQ9Y276 419 aa28.22■■■□□ 2.11
SPOCK3-221ENST00000512648 AKAP17AQ02040 695 aaKnown RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 GUCY1B3Q02153 619 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 DLGAP5Q15398 846 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 ECM29Q5VYK3 1845 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 ZFPM1Q8IX07 1006 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 KLHL34Q8N239 644 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 LZTS2Q9BRK4 669 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 TDRD3Q9H7E2 651 aaKnown RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 RCOR1Q9UKL0 485 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 ADAMTSL1Q8N6G6 1762 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 RPS12P25398 132 aaKnown RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 U2AF2P26368 475 aaKnown RBP eCLIP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 OTUD7BQ6GQQ9 843 aa28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 LEO1Q8WVC0 666 aaPredicted RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 ZBED3Q96IU2 234 aaPredicted RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 ISY1Q9ULR0 285 aaKnown RBP28.21■■■□□ 2.11
SPOCK3-221ENST00000512648 GADD45BO75293 160 aaPredicted RBP28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 SMARCA1P28370 1054 aa28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 SH3BP5LQ7L8J4 393 aa28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 AIFM3Q96NN9 605 aa28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 MTMR4Q9NYA4 1195 aa28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 TMOD2Q9NZR1 351 aa28.2■■■□□ 2.1
SPOCK3-221ENST00000512648 XBP1P17861 261 aa28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 PKN1Q16512 942 aa28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 SRBD1Q8N5C6 995 aaKnown RBP28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 CEP95Q96GE4 821 aa28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 SPATA32Q96LK8 384 aa28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 TFIP11Q9UBB9 837 aaKnown RBP28.19■■■□□ 2.1
SPOCK3-221ENST00000512648 PALM3A6NDB9 673 aaPredicted RBP28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 DDTLA6NHG4 134 aaPredicted RBP28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 PLEKHA8P1O95397 391 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 GUCY1A2P33402 732 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 FOSBP53539 338 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 TATDN1Q6P1N9 297 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 FAM177A1Q8N128 213 aaPredicted RBP28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 RTEL1Q9NZ71 1219 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 STX8Q9UNK0 236 aa28.18■■■□□ 2.1
SPOCK3-221ENST00000512648 MMP1P03956 469 aa28.17■■■□□ 2.1
SPOCK3-221ENST00000512648 SPDYE2Q495Y8 402 aa28.17■■■□□ 2.1
SPOCK3-221ENST00000512648 ZNF70Q9UC06 446 aaPredicted RBP28.17■■■□□ 2.1
SPOCK3-221ENST00000512648 CNTNAP5Q8WYK1 1306 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 FZD9O00144 591 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 AKR1B1P15121 316 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 CACNB3P54284 484 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 FAM151AQ8WW52 585 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 SYAP1Q96A49 352 aaPredicted RBP28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 FOXP1Q9H334 677 aaPredicted RBP28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 GJB4Q9NTQ9 266 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 MAD2L2Q9UI95 211 aa28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 ZBTB12Q9Y330 459 aaPredicted RBP28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 V9GY48 417 aaPredicted RBP28.16■■■□□ 2.1
SPOCK3-221ENST00000512648 ZNF280AP59817 542 aaPredicted RBP28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 TCP10Q12799 353 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 SAFBQ15424 915 aaKnown RBP eCLIP28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 MYSM1Q5VVJ2 828 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 CMTR1Q8N1G2 835 aaKnown RBP28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 DPF2Q92785 391 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 GZF1Q9H116 711 aaPredicted RBP28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 DNAJC18Q9H819 358 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 ZNF445P59923 1031 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 CAVIN1Q6NZI2 390 aaKnown RBP28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 POLR3EQ9NVU0 708 aa28.15■■■□□ 2.1
SPOCK3-221ENST00000512648 KIF28PB7ZC32 967 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 TTLL1O95922 423 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 FAM83AQ86UY5 434 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 CCDC82Q8N4S0 544 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 NLGN2Q8NFZ4 835 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 USP28Q96RU2 1077 aa28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 HERC5Q9UII4 1024 aaKnown RBP28.14■■■□□ 2.09
SPOCK3-221ENST00000512648 TCHHQ07283 1943 aa28.13■■■□□ 2.09
SPOCK3-221ENST00000512648 UBE2Q2LH0YL09 131 aa28.13■■■□□ 2.09
SPOCK3-221ENST00000512648 YEATS4O95619 227 aa28.13■■■□□ 2.09
SPOCK3-221ENST00000512648 NASPP49321 788 aaPredicted RBP28.13■■■□□ 2.09
SPOCK3-221ENST00000512648 ZSCAN29Q8IWY8 852 aaPredicted RBP28.13■■■□□ 2.09
SPOCK3-221ENST00000512648 PFKFB3Q16875 520 aaPredicted RBP28.12■■■□□ 2.09
SPOCK3-221ENST00000512648 MKL1Q969V6 931 aa28.12■■■□□ 2.09
SPOCK3-221ENST00000512648 PHF20Q9BVI0 1012 aa28.12■■■□□ 2.09
SPOCK3-221ENST00000512648 SPZ1Q9BXG8 430 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms