RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 CAP2P40123 477 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 BACE1P56817 501 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 FAAP100Q0VG06 881 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 MTMR2Q13614 643 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 MFSD5Q6N075 450 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 PSRC1Q6PGN9 363 aaPredicted RBP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 DDX4Q9NQI0 724 aaKnown RBP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 YBX2Q9Y2T7 364 aaKnown RBP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 GAKO14976 1311 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 USP34Q70CQ2 3546 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 FAM196BA6NMK8 535 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 PDE8BO95263 885 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 CCNA1P78396 465 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 FLIIQ13045 1269 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 UIMC1Q96RL1 719 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 TBX21Q9UL17 535 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 RABGAP1Q9Y3P9 1069 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 ZNF521Q96K83 1311 aa9.71□□□□□ -0.85
DEPDC1B-205ENST00000512078 C19orf81C9J6K1 198 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 CNMDO75829 334 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 CALD1Q05682 793 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 FKBP5Q13451 457 aaPredicted RBP9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 RRP1BQ14684 758 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 FAM47AQ5JRC9 791 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 METTL24Q5JXM2 366 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 MTCH2Q9Y6C9 303 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.86
DEPDC1B-205ENST00000512078 A0A1W2PQ45 241 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 A0A1W2PQY0 241 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 GTPBP6O43824 516 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 IFIT1P09914 478 aaKnown RBP9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 SLC5A1P13866 664 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 FGFR2P21802 821 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 PICALMQ13492 652 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 PPP2R2DQ66LE6 453 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 ZNF365Q70YC5 407 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 HLA-CQ95604 372 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
DEPDC1B-205ENST00000512078 COL4A4P53420 1690 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 DCDC2CA8MYV0 355 aa9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 GRM8O00222 908 aa9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 ALADP13716 330 aa9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 LRRC24Q50LG9 513 aa9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 WDR78Q5VTH9 848 aa9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 MTIF3Q9H2K0 278 aaKnown RBP9.69□□□□□ -0.86
DEPDC1B-205ENST00000512078 ROBO3Q96MS0 1386 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L10C9JJH3 530 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 CSF2RAP15509 400 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 BEND3Q5T5X7 828 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 RNF180Q86T96 592 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 TMEM199Q8N511 208 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 FOCADQ5VW36 1801 aa9.68□□□□□ -0.86
DEPDC1B-205ENST00000512078 ASNSP08243 561 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 ACRP10323 421 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 GJD3Q8N144 294 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 XPNPEP3Q9NQH7 507 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 HERC5Q9UII4 1024 aaKnown RBP9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 MROH7Q68CQ1 1323 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 RARBP10826 455 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 BTDP43251 543 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 LBX2Q6XYB7 198 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 DPP9Q86TI2 863 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 FAM178BQ8IXR5 827 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 KAZALD1Q96I82 304 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 IL23AQ9NPF7 189 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 STARD7Q9NQZ5 370 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 PCDHA11Q9Y5I1 949 aa9.67□□□□□ -0.86
DEPDC1B-205ENST00000512078 PTPRZ1P23471 2315 aaPredicted RBP9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 ADORA2AP29274 412 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 RHBDL3P58872 404 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 TWISTNBQ3B726 338 aaPredicted RBP9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 PRAMEF19Q5SWL8 479 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 TSEN34Q9BSV6 310 aaKnown RBP9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 GINM1Q9NU53 330 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 CACNA1HO95180 2353 aa9.66□□□□□ -0.86
DEPDC1B-205ENST00000512078 MROH7-TTC4A0A0A0MT08 1334 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L15C9J2P7 530 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L13C9JLJ4 530 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L11C9JVI0 530 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L18D6R9N7 530 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L22D6RA61 530 aa9.65□□□□□ -0.86
DEPDC1B-205ENST00000512078 USP17L17D6RBQ6 530 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms