RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 USP17L11C9JVI0 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L21D6R901 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L18D6R9N7 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L22D6RA61 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L17D6RBQ6 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L19D6RCP7 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L20D6RJB6 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 PES1O00541 588 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 CAPN5O15484 640 aaPredicted RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 STAU1O95793 577 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 RPN1P04843 607 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 CCDC159P0C7I6 412 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 HOXC9P31274 260 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.57
MATR3-219ENST00000512040 GNALP38405 381 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L24Q0WX57 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 CRTC2Q53ET0 693 aaPredicted RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 DNTTIP2Q5QJE6 756 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 NFXL1Q6ZNB6 911 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 TRIM50Q86XT4 487 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 CHCHD4Q8N4Q1 142 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 PAF1Q8N7H5 531 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 DNAJC5GQ8N7S2 189 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 ACRBPQ8NEB7 543 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 SLC16A10Q8TF71 515 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 ERP27Q96DN0 273 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 TSPY26PQ9H489 355 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 DNAAF2Q9NVR5 837 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 TFCP2L1Q9NZI6 479 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 DMGDHQ9UI17 866 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 CCNL1Q9UK58 526 aaPredicted RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 TTF2Q9UNY4 1162 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 ZNF652Q9Y2D9 606 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 TNRC6CQ9HCJ0 1690 aaKnown RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 INSRP06213 1382 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 KDRP35968 1356 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 PLEKHG2Q9H7P9 1386 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 COL11A2P13942 1736 aaPredicted RBP5.26□□□□□ -1.57
MATR3-219ENST00000512040 IGSF1Q8N6C5 1336 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 AFDNP55196 1824 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 SOWAHDA6NJG2 315 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 TRIM64CA6NLI5 447 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 VGLL3A8MV65 326 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 FYB1O15117 783 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 TBX3O15119 743 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 TNRC18O15417 2968 aaPredicted RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 CYP27B1O15528 508 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 KIF5CO60282 957 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 RNASEH2AO75792 299 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 IPO7O95373 1038 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 RBP3P10745 1247 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 PAX7P23759 505 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 PSMA3P25788 255 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 ATP1A2P50993 1020 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 RELBQ01201 579 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 TMED1Q13445 227 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 SIM2Q14190 667 aaPredicted RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 RRS1Q15050 365 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 LONRF1Q17RB8 773 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 ODR4Q5SWX8 454 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 CYP2U1Q7Z449 544 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 TMEM151AQ8N4L1 468 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 SYTL4Q96C24 671 aaPredicted RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 OSBPL2Q9H1P3 480 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 GMPR2Q9P2T1 348 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 KIAA1024Q9UPX6 916 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 DIS3Q9Y2L1 958 aaKnown RBP5.25□□□□□ -1.57
MATR3-219ENST00000512040 SLC45A1Q9Y2W3 748 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 PCDHGA11Q9Y5H2 935 aa5.25□□□□□ -1.57
MATR3-219ENST00000512040 CCDC88AQ3V6T2 1871 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 KCPQ6ZWJ8 1503 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 NRXN2Q9P2S2 1712 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 ZBTB7BO15156 539 aaPredicted RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 HTATSF1O43719 755 aaKnown RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 CAND2O75155 1236 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 TPPPO94811 219 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 ADH1AP07327 375 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 TPM2P07951 284 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 NBPF7P0C2Y1 421 aaPredicted RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 USP5P45974 858 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 TRAPPC10P48553 1259 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 PTK7Q13308 1070 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 ITPK1Q13572 414 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 ENOX2Q16206 610 aaKnown RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 CCDC93Q567U6 631 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 CCDC102BQ68D86 513 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 CCDC70Q6NSX1 233 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 IQCF2Q8IXL9 164 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 CRIPAKQ8N1N5 446 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 PRPF38AQ8NAV1 312 aaKnown RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 LINC00116Q8NCU8 138 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 TPCN2Q8NHX9 752 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 RAPGEF4Q8WZA2 1011 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 MPHOSPH6Q99547 160 aaKnown RBP5.24□□□□□ -1.57
MATR3-219ENST00000512040 GGNBP2Q9H3C7 697 aa5.24□□□□□ -1.57
MATR3-219ENST00000512040 ZNF395Q9H8N7 513 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms