RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 F2P00734 622 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 KIF5BP33176 963 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 SH3BGRP55822 239 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 BPIFB3P59826 476 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 SLC20A2Q08357 652 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 GRM1Q13255 1194 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PTK7Q13308 1070 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PPP4R3BQ5MIZ7 849 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 DAAM2Q86T65 1068 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 DDX42Q86XP3 938 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 ENAHQ8N8S7 591 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PHC3Q8NDX5 983 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 CHMP4CQ96CF2 233 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 TRMT2BQ96GJ1 504 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 THUMPD2Q9BTF0 503 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 TRMT1Q9NXH9 659 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 CDV3Q9UKY7 258 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 MORC2Q9Y6X9 1032 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PARP4Q9UKK3 1724 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 UTRNP46939 3433 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 KDRP35968 1356 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 BAIAP3O94812 1187 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 IPO7O95373 1038 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 POU3F3P20264 500 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TIE1P35590 1138 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 DAB2P98082 770 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 PDE1CQ14123 709 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 EZH2Q15910 746 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 AMOTQ4VCS5 1084 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 UNC5DQ6UXZ4 953 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 HOMER1Q86YM7 354 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 DDX12PQ92771 950 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 N4BP2L2Q92802 583 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZNF594Q96JF6 807 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 MAP7D2Q96T17 732 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 CNNM2Q9H8M5 875 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 DIAPH3Q9NSV4 1193 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 UTP6Q9NYH9 597 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 PPP1R9AQ9ULJ8 1098 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 WNK3Q9BYP7 1800 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TMEM110-MUSTN1A8MSY1 372 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 CTAGE5O15320 804 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 AKAP10O43572 662 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 PRPF40AO75400 957 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 IDEP14735 1019 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 XBP1P17861 261 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 SERPINB3P29508 390 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TMED1Q13445 227 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 AGAP9Q5VTM2 703 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 LVRNQ6Q4G3 990 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 NFATC2IPQ8NCF5 419 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 GTF3C2Q8WUA4 911 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 HVCN1Q96D96 273 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 FEZ1Q99689 392 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TSPY26PQ9H489 355 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 ATG3Q9NT62 314 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 CHCHD3Q9NX63 227 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 TRPC6Q9Y210 931 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 DNMT3AQ9Y6K1 912 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 RGPD1P0DJD0 1748 aa5.82□□□□□ -1.48
TRAPPC11-208ENST00000511955 PTCD1O75127 700 aaKnown RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SSBP05455 408 aaKnown RBP eCLIP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SKILP12757 684 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SOX11P35716 441 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 STT3AP46977 705 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 CABP4P57796 275 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 DGKHQ86XP1 1220 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 EPS8L1Q8TE68 723 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SMCR8Q8TEV9 937 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 RTF1Q92541 710 aaKnown RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 FRAT1Q92837 279 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 ATP6V1E2Q96A05 226 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TMOD3Q9NYL9 352 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 MIS18AQ9NYP9 233 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SEPT3Q9UH03 358 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 CEP131Q9UPN4 1083 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 NCAPD2Q15021 1401 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 MOXD2PA6NHM9 499 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TSPY2A6NKD2 308 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 GNAT3A8MTJ3 354 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 ELL2O00472 640 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 APAF1O14727 1248 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 KATNA1O75449 491 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TSPY3P0CV98 308 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TSPY8P0CW00 308 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 RPL17P18621 184 aaKnown RBP5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 BAG6P46379 1132 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 RENBPP51606 427 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 CLCN6P51797 869 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TSPY1Q01534 308 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 DMTNQ08495 405 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 TEFQ10587 303 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 SLC39A6Q13433 755 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 BIRC3Q13489 604 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 AKAP4Q5JQC9 854 aa5.81□□□□□ -1.48
TRAPPC11-208ENST00000511955 ANKS3Q6ZW76 656 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms