RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 STK11IPQ8N1F8 1099 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 ADGRA2Q96PE1 1338 aa19.16■□□□□ 0.66
SIM1-204ENST00000511871 RASA1P20936 1047 aa19.16■□□□□ 0.66
SIM1-204ENST00000511871 MFAP1P55081 439 aaKnown RBP19.16■□□□□ 0.66
SIM1-204ENST00000511871 ERICH6BQ5W0A0 696 aa19.16■□□□□ 0.66
SIM1-204ENST00000511871 ACER1Q8TDN7 264 aa19.16■□□□□ 0.66
SIM1-204ENST00000511871 MGAMO43451 1857 aa19.16■□□□□ 0.66
SIM1-204ENST00000511871 MKNK2Q9HBH9 465 aa19.15■□□□□ 0.66
SIM1-204ENST00000511871 TMOD4Q9NZQ9 345 aa19.15■□□□□ 0.66
SIM1-204ENST00000511871 ZSWIM8A7E2V4 1837 aa19.15■□□□□ 0.66
SIM1-204ENST00000511871 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
SIM1-204ENST00000511871 FGAP02671 866 aa19.14■□□□□ 0.66
SIM1-204ENST00000511871 CYP2C8P10632 490 aa19.14■□□□□ 0.66
SIM1-204ENST00000511871 USP17L2Q6R6M4 530 aa19.14■□□□□ 0.66
SIM1-204ENST00000511871 PARK7Q99497 189 aaKnown RBP19.14■□□□□ 0.66
SIM1-204ENST00000511871 KIAA1683Q9H0B3 1180 aa19.14■□□□□ 0.66
SIM1-204ENST00000511871 EMILIN3Q9NT22 766 aa19.14■□□□□ 0.66
SIM1-204ENST00000511871 CHMLP26374 656 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 SP3Q02447 781 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 SIAH1Q8IUQ4 282 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 C12orf42Q96LP6 360 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 FEZ1Q99689 392 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 ZNF287Q9HBT7 754 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 ANAPC4Q9UJX5 808 aa19.14■□□□□ 0.65
SIM1-204ENST00000511871 A0A1W2PRG0 241 aa19.13■□□□□ 0.65
SIM1-204ENST00000511871 SLC3A2P08195 630 aaKnown RBP19.13■□□□□ 0.65
SIM1-204ENST00000511871 C17orf99Q6UX52 265 aa19.13■□□□□ 0.65
SIM1-204ENST00000511871 CLEC10AQ8IUN9 316 aa19.13■□□□□ 0.65
SIM1-204ENST00000511871 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
SIM1-204ENST00000511871 IL25Q9H293 177 aa19.13■□□□□ 0.65
SIM1-204ENST00000511871 PRDM1O75626 825 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 USP14P54578 494 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 CTDSPL2Q05D32 466 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 PDE4BQ07343 736 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.65
SIM1-204ENST00000511871 ZYXQ15942 572 aaKnown RBP19.12■□□□□ 0.65
SIM1-204ENST00000511871 TNS4Q8IZW8 715 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 PPP4R2Q9NY27 417 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 CPA4Q9UI42 421 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 PNMA3Q9UL41 463 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.12■□□□□ 0.65
SIM1-204ENST00000511871 PARP14Q460N5 1801 aa19.12■□□□□ 0.65
SIM1-204ENST00000511871 HOXA7P31268 230 aaPredicted RBP19.11■□□□□ 0.65
SIM1-204ENST00000511871 ICA1Q05084 483 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
SIM1-204ENST00000511871 ZNF444Q8N0Y2 327 aaPredicted RBP19.11■□□□□ 0.65
SIM1-204ENST00000511871 ERO1AQ96HE7 468 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 KANSL2Q9H9L4 492 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 TACC3Q9Y6A5 838 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 RAD50Q92878 1312 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 RLFQ13129 1914 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 BCRP11274 1271 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 OSBPP22059 807 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 CD99L2Q8TCZ2 262 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 RUFY2Q8WXA3 655 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
SIM1-204ENST00000511871 ARHGEF10LQ9HCE6 1279 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 TMX2Q9Y320 296 aa19.11■□□□□ 0.65
SIM1-204ENST00000511871 DOCK3Q8IZD9 2030 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 IGKV6D-41A0A0C4DH26 115 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 EEF2P13639 858 aaKnown RBP19.1■□□□□ 0.65
SIM1-204ENST00000511871 CAP1Q01518 475 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 DSCC1Q9BVC3 393 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 INCENPQ9NQS7 918 aa19.1■□□□□ 0.65
SIM1-204ENST00000511871 FGRP09769 529 aa19.09■□□□□ 0.65
SIM1-204ENST00000511871 PLIN4Q96Q06 1357 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 ORC4O43929 436 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 VCAM1P19320 739 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 NEDD1Q8NHV4 660 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.65
SIM1-204ENST00000511871 MCOLN1Q9GZU1 580 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 NBPF3Q9H094 633 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 SH2D4AQ9H788 454 aa19.08■□□□□ 0.65
SIM1-204ENST00000511871 HAND2P61296 217 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
SIM1-204ENST00000511871 FAM47AQ5JRC9 791 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 KIAA1755Q5JYT7 1200 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 NYAP2Q9P242 653 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L15C9J2P7 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L13C9JLJ4 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L11C9JVI0 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L18D6R9N7 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L22D6RA61 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L17D6RBQ6 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L19D6RCP7 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L20D6RJB6 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 SGSM2O43147 1006 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 TSPY3P0CV98 308 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 TSPY8P0CW00 308 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 LACTBP83111 547 aaPredicted RBP19.07■□□□□ 0.64
SIM1-204ENST00000511871 TFAP4Q01664 338 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 ATP2B2Q01814 1243 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 USP17L24Q0WX57 530 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 CATSPERGQ6ZRH7 1159 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 P2RX7Q99572 595 aaKnown RBP19.07■□□□□ 0.64
SIM1-204ENST00000511871 VCPKMTQ9H867 229 aa19.07■□□□□ 0.64
SIM1-204ENST00000511871 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
SIM1-204ENST00000511871 OTOP1Q7RTM1 612 aa19.06■□□□□ 0.64
SIM1-204ENST00000511871 TRIM17Q9Y577 477 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms