RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZBTB8OSQ8IWT0 167 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 SPDYE1Q8NFV5 336 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 MICAL1Q8TDZ2 1067 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 GANCQ8TET4 914 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CCDC68Q9H2F9 335 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CALCOCO1Q9P1Z2 691 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 ABCA6Q8N139 1617 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 SPTLC2O15270 562 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 ADCY5O95622 1261 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 HOXC9P31274 260 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 TMTC4Q5T4D3 741 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CCDC121Q6ZUS5 278 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 PNMA2Q9UL42 364 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 GUCA1BQ9UMX6 200 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 LUC7L2Q9Y383 392 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 GLI2P10070 1586 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 RAD50Q92878 1312 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 GOLGA8CPA6NN73 597 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 KIF3CO14782 793 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CASQ2O14958 399 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 CETN3O15182 167 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 MBD4O95243 580 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 MNAT1P51948 309 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 VAV2P52735 878 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 SARNPP82979 210 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 FYB2Q5VWT5 728 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 NCAPG2Q86XI2 1143 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 RYBPQ8N488 228 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 DACT3Q96B18 629 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 AP5M1Q9H0R1 490 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 ITM2BQ9Y287 266 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CCNT1O60563 726 aaKnown RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 TNNI1P19237 187 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 FLAD1Q8NFF5 587 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 UBLCP1Q8WVY7 318 aaPredicted RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 TEKT1Q969V4 418 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 DCAF5Q96JK2 942 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TRERF1Q96PN7 1200 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ZBED2Q9BTP6 218 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 CDK12Q9NYV4 1490 aaPredicted RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 ZEB2O60315 1214 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 KCNA6P17658 529 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TMOD1P28289 359 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 SESTD1Q86VW0 696 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TTC30AQ86WT1 665 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ANKRD35Q8N283 1001 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ARFGAP2Q8N6H7 521 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 UBL4BQ8N7F7 174 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 PLEKHF1Q96S99 279 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ZRANB1Q9UGI0 708 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 FNDC3AQ9Y2H6 1198 aaKnown RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 NUB1Q9Y5A7 615 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 SH3TC1Q8TE82 1336 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 VWA3AA6NCI4 1184 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 POLR2BP30876 1174 aaKnown RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 CCNA1P78396 465 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 MCM6Q14566 821 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ARHGEF16Q5VV41 709 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TRIM50Q86XT4 487 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 MYCT1Q8N699 235 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 CHURC1Q8WUH1 139 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 DNAI1Q9UI46 699 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 CAMSAP1Q5T5Y3 1602 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TESPA1A2RU30 521 aaPredicted RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 EXOC3O60645 756 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 IVLP07476 585 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 PDE6AP16499 860 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 TXKP42681 527 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 PDE4DQ08499 809 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 NEDD9Q14511 834 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ZNF174Q15697 407 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 MMS19Q96T76 1030 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 ARFGAP3Q9NP61 516 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 CEP85Q6P2H3 762 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 MEIS3Q99687 375 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 NOC4LQ9BVI4 516 aaKnown RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 SRRTQ9BXP5 876 aaKnown RBP6.41□□□□□ -1.38
USP38-203ENST00000511739 TSGA10Q9BZW7 698 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 VCX3BQ9H321 246 aa6.41□□□□□ -1.38
USP38-203ENST00000511739 AOX1Q06278 1338 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 ACTN4O43707 911 aaKnown RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 MGEA5O60502 916 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 HCLS1P14317 486 aaPredicted RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 RXRAP19793 462 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 FBLN1P23142 703 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 PDE1AP54750 535 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 RNASELQ05823 741 aaKnown RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 NAA25Q14CX7 972 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 HS1BP3Q53T59 392 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 CNNM4Q6P4Q7 775 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 AOPEPQ8N6M6 819 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 FAM8A1Q9UBU6 413 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 QRICH2Q9H0J4 1663 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 TTC41PQ6P2S7 1318 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 ERCC3P19447 782 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 RFC1P35251 1148 aaPredicted RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 CDR2Q01850 454 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms