RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 NKX2-3Q8TAU0 364 aa18.5■□□□□ 0.55
COL1A1-213ENST00000511732 FEZ1Q99689 392 aa18.5■□□□□ 0.55
COL1A1-213ENST00000511732 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
COL1A1-213ENST00000511732 MYH8P13535 1937 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 SGPL1O95470 568 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 UBE3CQ15386 1083 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 GPRC5AQ8NFJ5 357 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 DYNLL2Q96FJ2 89 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.49■□□□□ 0.55
COL1A1-213ENST00000511732 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
COL1A1-213ENST00000511732 CYP2D7A0A087X1C5 515 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 CNMDO75829 334 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 VCAM1P19320 739 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 ERVK-9P63128 1117 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 ERVK-24P63145 666 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 TRIM32Q13049 653 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 CATSPERGQ6ZRH7 1159 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 PAGR1Q9BTK6 254 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
COL1A1-213ENST00000511732 PORCNQ9H237 461 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-213ENST00000511732 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 PCDHB15Q9Y5E8 787 aa18.48■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP14P54578 494 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 ATP8A2Q9NTI2 1148 aa18.47■□□□□ 0.55
COL1A1-213ENST00000511732 MPHOSPH10O00566 681 aaKnown RBP18.46■□□□□ 0.55
COL1A1-213ENST00000511732 CYP2B6P20813 491 aa18.46■□□□□ 0.55
COL1A1-213ENST00000511732 C12orf60Q5U649 245 aa18.46■□□□□ 0.55
COL1A1-213ENST00000511732 TRIB2Q92519 343 aa18.46■□□□□ 0.55
COL1A1-213ENST00000511732 USP17L12C9JPN9 530 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 USP17L21D6R901 530 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 HMGCRP04035 888 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 AKR1B1P15121 316 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 GPR142Q7Z601 462 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 SIAH1Q8IUQ4 282 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-213ENST00000511732 USP6NLQ92738 828 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 RPAP3Q9H6T3 665 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-213ENST00000511732 SWAP70Q9UH65 585 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 SLC4A4Q9Y6R1 1079 aa18.45■□□□□ 0.54
COL1A1-213ENST00000511732 MAPK4P31152 587 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL1A1-213ENST00000511732 BTBD7Q9P203 1132 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 RLFQ13129 1914 aa18.44■□□□□ 0.54
COL1A1-213ENST00000511732 SPDYE16A6NNV3 312 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-213ENST00000511732 H0YGN5 161 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 FARP2O94887 1054 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-213ENST00000511732 TFRCP02786 760 aaKnown RBP18.43■□□□□ 0.54
COL1A1-213ENST00000511732 CDK8P49336 464 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
COL1A1-213ENST00000511732 MORN1Q5T089 497 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 CTR9Q6PD62 1173 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 KBTBD3Q8NAB2 608 aa18.43■□□□□ 0.54
COL1A1-213ENST00000511732 HABP4Q5JVS0 413 aaKnown RBP18.42■□□□□ 0.54
COL1A1-213ENST00000511732 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 SOCS4Q8WXH5 440 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 DPF3Q92784 378 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 OSBP2Q969R2 916 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 STRBPQ96SI9 672 aaKnown RBP18.42■□□□□ 0.54
COL1A1-213ENST00000511732 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
COL1A1-213ENST00000511732 XRCC5P13010 732 aaKnown RBP18.41■□□□□ 0.54
COL1A1-213ENST00000511732 CCL14Q16627 93 aa18.41■□□□□ 0.54
COL1A1-213ENST00000511732 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
COL1A1-213ENST00000511732 CCAR1Q8IX12 1150 aaKnown RBP18.41■□□□□ 0.54
COL1A1-213ENST00000511732 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-213ENST00000511732 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-213ENST00000511732 A0A0G2JMZ2 1700 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 ICA1Q05084 483 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 PI4K2BQ8TCG2 481 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 APPBP2Q92624 585 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-213ENST00000511732 TMX2Q9Y320 296 aa18.4■□□□□ 0.54
COL1A1-213ENST00000511732 ALPK3Q96L96 1907 aa18.39■□□□□ 0.53
COL1A1-213ENST00000511732 GREB1LQ9C091 1923 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-213ENST00000511732 RNF113AO15541 343 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms