RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PAOXQ6QHF9 649 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 RUFY4Q6ZNE9 571 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 ANKS3Q6ZW76 656 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 UBE3DQ7Z6J8 389 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 LSRQ86X29 649 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 OR6P1Q8NGX9 317 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 TMEM40Q8WWA1 233 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 ARMC5Q96C12 935 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 TRIM55Q9BYV6 548 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 SEMA6CQ9H3T2 930 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 PRKAG3Q9UGI9 489 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 DNAJA2O60884 412 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 SSTR4P31391 388 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 SLBPQ14493 270 aaKnown RBP eCLIP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 TNNI3KQ59H18 835 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 PRAMEF13Q5VWM6 474 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 SEZ6L2Q6UXD5 910 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 ARMCX6Q7L4S7 300 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 NLRC3Q7RTR2 1065 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 MCATQ8IVS2 390 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 MRPL41Q8IXM3 137 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 FAM169BQ8N8A8 192 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 RBBP8NLQ8NC74 664 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 HNRNPLLQ8WVV9 542 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 ATG4CQ96DT6 458 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 FOXQ1Q9C009 403 aa5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 OAS3Q9Y6K5 1087 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-207ENST00000511409 MEIS3P2A8K0S8 358 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 U2SURPO15042 1029 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 LRIG2O94898 1065 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 TAL1P17542 331 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 SPINK2P20155 84 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 GUCY2CP25092 1073 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 GBP1P32455 592 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 GP2P55259 537 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 SOGA3Q5TF21 947 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 GIMAP7Q8NHV1 300 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 SHKBP1Q8TBC3 707 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 GATA6Q92908 595 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 TM9SF2Q99805 663 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 ACTR10Q9NZ32 417 aa5.22□□□□□ -1.57
TRAPPC11-207ENST00000511409 DYNC1LI2O43237 492 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 CST3P01034 146 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 NME1P15531 152 aaKnown RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 POLR2BP30876 1174 aaKnown RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 GRIK1P39086 918 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 RBL2Q08999 1139 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 CDK5R2Q13319 367 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 CDCP2Q5VXM1 449 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 LARP1BQ659C4 914 aaKnown RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 ZAR1Q86SH2 424 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 SLFN12Q8IYM2 578 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 MFSD2AQ8NA29 543 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 CCDC74BQ96LY2 380 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 KIF2CQ99661 725 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 MIPEPQ99797 713 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 METTL22Q9BUU2 404 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 LNPKQ9C0E8 428 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 CNNM2Q9H8M5 875 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 RNF114Q9Y508 228 aa5.21□□□□□ -1.58
TRAPPC11-207ENST00000511409 MED26O95402 600 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 TGFB1P01137 390 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 F13BP05160 661 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 FZD5Q13467 585 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 DPH6Q7L8W6 267 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 TTC6Q86TZ1 520 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 DTX1Q86Y01 620 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 TOP6BLQ8N6T0 577 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 BAHD1Q8TBE0 780 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 TBC1D32Q96NH3 1257 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 SLC9A7Q96T83 725 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 TNKS2Q9H2K2 1166 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 ST7Q9NRC1 585 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
TRAPPC11-207ENST00000511409 A0A1W2PQH9 124 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 CCDC85CA6NKD9 419 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 WDR64B1ANS9 1081 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 TNFRSF10CO14798 259 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 DDAH1O94760 285 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 CAP2P40123 477 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 CYP27A1Q02318 531 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 ZYXQ15942 572 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 INTS3Q68E01 1043 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 LETMD1Q6P1Q0 360 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 UNC5AQ6ZN44 842 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 CDH24Q86UP0 819 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 FBXL6Q8N531 539 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 C19orf47Q8N9M1 422 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 CYB5D2Q8WUJ1 264 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 MFSD14AQ96MC6 490 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 ZSWIM4Q9H7M6 989 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 PRDM10Q9NQV6 1147 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 C1GALT1Q9NS00 363 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 ATG3Q9NT62 314 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 FAM86C1Q9NVL1 165 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 PIM2Q9P1W9 311 aa5.19□□□□□ -1.58
TRAPPC11-207ENST00000511409 RGS13O14921 159 aa5.18□□□□□ -1.58
TRAPPC11-207ENST00000511409 KLF4O43474 513 aa5.18□□□□□ -1.58
TRAPPC11-207ENST00000511409 FAM87AP0C7U9 286 aa5.18□□□□□ -1.58
TRAPPC11-207ENST00000511409 ACRP10323 421 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms