RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MIPEPQ99797 713 aa6.68□□□□□ -1.34
HMGB3P13-201ENST00000511263 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 GARTP22102 1010 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 KIR3DL1P43629 444 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 BNIP3Q12983 259 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 PLCL1Q15111 1095 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 ZNF124Q15973 351 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 ZNF792Q3KQV3 632 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 SFRP5Q5T4F7 317 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 LDLRAD1Q5T700 205 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 LETMD1Q6P1Q0 360 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 NT5DC4Q86YG4 428 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 TJP2Q9UDY2 1190 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 ADAMTS1Q9UHI8 967 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 SLC5A6Q9Y289 635 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 SNX11Q9Y5W9 270 aa6.67□□□□□ -1.34
HMGB3P13-201ENST00000511263 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 ATE1O95260 518 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 HTR3BO95264 441 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 TNNI2P48788 182 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 CDK8P49336 464 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 SLFN12Q8IYM2 578 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 PHACTR4Q8IZ21 702 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 CCDC74BQ96LY2 380 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 TGIF2Q9GZN2 237 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 CCSER2Q9H7U1 834 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 FBRSQ9HAH7 460 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 REV1Q9UBZ9 1251 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 U3KQE9 123 aa6.66□□□□□ -1.34
HMGB3P13-201ENST00000511263 FAM155AB1AL88 458 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 CEACAM5P06731 702 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 TCF3P15923 654 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 NKG7Q16617 165 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 ZNF428Q96B54 188 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 UBP1Q9NZI7 540 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 KCNH3Q9ULD8 1083 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 PCDHB14Q9Y5E9 798 aa6.65□□□□□ -1.34
HMGB3P13-201ENST00000511263 UNCXA6NJT0 531 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 GRIN3BO60391 1043 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 RAG1P15918 1043 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 CD96P40200 585 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 CCNFP41002 786 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 CLCN7P51798 805 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 ZNF394Q53GI3 561 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 C22orf34Q6ZV56 151 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 FAM181AQ8N9Y4 354 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 HRASLS5Q96KN8 279 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 EHMT1Q9H9B1 1298 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 GMIPQ9P107 970 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 VAV3Q9UKW4 847 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 CEP131Q9UPN4 1083 aa6.64□□□□□ -1.35
HMGB3P13-201ENST00000511263 LEFTY1O75610 366 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 SLITRK5O94991 958 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 GBP1P32455 592 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 GK5Q6ZS86 529 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 MFSD4AQ8N468 514 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 FBXO27Q8NI29 283 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 XAGE3Q8WTP9 111 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 CORINQ9Y5Q5 1042 aa6.63□□□□□ -1.35
HMGB3P13-201ENST00000511263 CD8BP10966 210 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 ERCC5P28715 1186 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 RNF4P78317 190 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 PRKCQQ04759 706 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 PIWIL2Q8TC59 973 aaKnown RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 GPRASP2Q96D09 838 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 EAF1Q96JC9 268 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 KRTAP4-2Q9BYR5 136 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 TRIT1Q9H3H1 467 aaKnown RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 POLR3KQ9Y2Y1 108 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P13-201ENST00000511263 EOMESO95936 686 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 ZNF865P0CJ78 1059 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 OXCT1P55809 520 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 UBE3DQ7Z6J8 389 aa6.61□□□□□ -1.35
HMGB3P13-201ENST00000511263 ASPNQ9BXN1 380 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms