RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 SNX21Q969T3 373 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ZBED3Q96IU2 234 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-209ENST00000511125 WRNIP1Q96S55 665 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMAD1-209ENST00000511125 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
SMAD1-209ENST00000511125 SMC3Q9UQE7 1217 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 EPB41L2O43491 1005 aaKnown RBP9.43□□□□□ -0.9
SMAD1-209ENST00000511125 GJB2P29033 226 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 SLC16A2P36021 539 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 GABPAQ06546 454 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 ZNF654Q8IZM8 581 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 STAG2Q8N3U4 1231 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
SMAD1-209ENST00000511125 PLEKHA8P1O95397 391 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 EEF2P13639 858 aaKnown RBP9.43□□□□□ -0.9
SMAD1-209ENST00000511125 IKQ13123 557 aaPredicted RBP9.43□□□□□ -0.9
SMAD1-209ENST00000511125 TNFAIP1Q13829 316 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 KCTD1Q719H9 257 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 HOMER1Q86YM7 354 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 CERS3Q8IU89 383 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 MYH1P12882 1939 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 ANKRD1Q15327 319 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 FOXP4Q8IVH2 680 aaPredicted RBP9.43□□□□□ -0.9
SMAD1-209ENST00000511125 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
SMAD1-209ENST00000511125 TRIM75PA6NK02 468 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 ORC4O43929 436 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
SMAD1-209ENST00000511125 CCDC96Q2M329 555 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 NBPF11Q86T75 865 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 ZNF287Q9HBT7 754 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
SMAD1-209ENST00000511125 ICA1Q05084 483 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 SEC23AQ15436 765 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 TTBK2Q6IQ55 1244 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 FEZ1Q99689 392 aa9.42□□□□□ -0.9
SMAD1-209ENST00000511125 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 MCTP1Q6DN14 999 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 CLMNQ96JQ2 1002 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 A0A1W2PRG0 241 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 PTPDC1A2A3K4 754 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 GUCY1A2P33402 732 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 RTN1Q16799 776 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 NEDD1Q8NHV4 660 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 IQCA1LA6NCM1 817 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 NBR1Q14596 966 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 FAM83AQ86UY5 434 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 FANCBQ8NB91 859 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
SMAD1-209ENST00000511125 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
SMAD1-209ENST00000511125 MCM2P49736 904 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 CDCA5Q96FF9 252 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ZNF341Q9BYN7 854 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ELP3Q9H9T3 547 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 MAST2Q6P0Q8 1798 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ZBTB22O15209 634 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 FGRP09769 529 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 SPP2Q13103 211 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 CTCFLQ8NI51 663 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ZSCAN31Q96LW9 406 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-209ENST00000511125 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 ZBTB21Q9ULJ3 1066 aa9.4□□□□□ -0.9
SMAD1-209ENST00000511125 NAV1Q8NEY1 1877 aa9.4□□□□□ -0.91
SMAD1-209ENST00000511125 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.91
SMAD1-209ENST00000511125 PEX10O60683 326 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 PFKFB2O60825 505 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 KIAA1755Q5JYT7 1200 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 LARP1BQ659C4 914 aaKnown RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 TMED8Q6PL24 325 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 SIAH1Q8IUQ4 282 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 CEP350Q5VT06 3117 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 CENPFP49454 3210 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 TTLL1O95922 423 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 CAP2P40123 477 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 USP50Q70EL3 339 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 PGAP2Q9UHJ9 254 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 ZNF646O15015 1829 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-209ENST00000511125 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
SMAD1-209ENST00000511125 LIFRP42702 1097 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms