RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 CACNB2Q08289 660 aaPredicted RBP10.13□□□□□ -0.79
TRIO-217ENST00000511019 TTF1Q15361 905 aaPredicted RBP10.13□□□□□ -0.79
TRIO-217ENST00000511019 MAP3K21Q5TCX8 1036 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 CEP85Q6P2H3 762 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 GPR142Q7Z601 462 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 USP6NLQ92738 828 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 C12orf42Q96LP6 360 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 KIAA1683Q9H0B3 1180 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 PORCNQ9H237 461 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 EXOC6BQ9Y2D4 811 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 NDUFB9Q9Y6M9 179 aa10.13□□□□□ -0.79
TRIO-217ENST00000511019 MAGEB6P1A0A0J9YX57 407 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 MS4A1P11836 297 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
TRIO-217ENST00000511019 PLCD1P51178 756 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 MAP2K5Q13163 448 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 CCL14Q16627 93 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 MORN1Q5T089 497 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 WDR78Q5VTH9 848 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 CLASRPQ8N2M8 674 aaKnown RBP10.12□□□□□ -0.79
TRIO-217ENST00000511019 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 IL1RAPL2Q9NP60 686 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 ZMYND8Q9ULU4 1186 aaPredicted RBP10.12□□□□□ -0.79
TRIO-217ENST00000511019 HTTP42858 3142 aa10.12□□□□□ -0.79
TRIO-217ENST00000511019 SLC15A5A6NIM6 579 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 SYN1P17600 705 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 PTPREP23469 700 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 CCND3P30281 292 aaPredicted RBP10.11□□□□□ -0.79
TRIO-217ENST00000511019 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 COG2Q14746 738 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 MFSD14CQ5VZR4 134 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 LHX8Q68G74 356 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
TRIO-217ENST00000511019 MIER1Q8N108 512 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 ACER1Q8TDN7 264 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 GDF15Q99988 308 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 RIOK1Q9BRS2 568 aaKnown RBP10.11□□□□□ -0.79
TRIO-217ENST00000511019 CRNKL1Q9BZJ0 848 aaKnown RBP10.11□□□□□ -0.79
TRIO-217ENST00000511019 MCM9Q9NXL9 1143 aa10.11□□□□□ -0.79
TRIO-217ENST00000511019 PTPRFP10586 1907 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 APBB1O00213 710 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
TRIO-217ENST00000511019 CNMDO75829 334 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
TRIO-217ENST00000511019 VCAM1P19320 739 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 CNGA1P29973 690 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 SHMT1P34896 483 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 SEPT2Q15019 361 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 KIF1BPQ96EK5 621 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 LRCH3Q96II8 777 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 APBA2Q99767 749 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 BCL11AQ9H165 835 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 RPAP3Q9H6T3 665 aaPredicted RBP10.1□□□□□ -0.79
TRIO-217ENST00000511019 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
TRIO-217ENST00000511019 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 GOLIM4O00461 696 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 SOX1O00570 391 aaPredicted RBP10.09□□□□□ -0.79
TRIO-217ENST00000511019 HMMRO75330 724 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 COL6A1P12109 1028 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 PDE6AP16499 860 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 GABPAQ06546 454 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 LBX2Q6XYB7 198 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 DPP9Q86TI2 863 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRIO-217ENST00000511019 DNAJC2Q99543 621 aaKnown RBP10.09□□□□□ -0.79
TRIO-217ENST00000511019 BTBD7Q9P203 1132 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 CENPFP49454 3210 aa10.09□□□□□ -0.79
TRIO-217ENST00000511019 ZNF532Q9HCE3 1301 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 STRNO43815 780 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 MSCO60682 206 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 HOXC6P09630 235 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 GUCY1A2P33402 732 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
TRIO-217ENST00000511019 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 SDR42E1Q8WUS8 393 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 UBE2OQ9C0C9 1292 aaKnown RBP10.08□□□□□ -0.8
TRIO-217ENST00000511019 SENP6Q9GZR1 1112 aaPredicted RBP10.08□□□□□ -0.8
TRIO-217ENST00000511019 CHMP4BQ9H444 224 aaKnown RBP10.08□□□□□ -0.8
TRIO-217ENST00000511019 FLRT1Q9NZU1 646 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 SWAP70Q9UH65 585 aa10.08□□□□□ -0.8
TRIO-217ENST00000511019 PFASO15067 1338 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 ATAD5Q96QE3 1844 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 MKI67P46013 3256 aaKnown RBP10.07□□□□□ -0.8
TRIO-217ENST00000511019 A0A1W2PRG0 241 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 TCRBV5S4A2TA0A5A2 114 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
TRIO-217ENST00000511019 CYP2C19P33261 490 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 GRB14Q14449 540 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 LRRC26Q2I0M4 334 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
TRIO-217ENST00000511019 TDHQ8IZJ6 230 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms