RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 GOLGA6L9A6NEM1 432 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 CBX1P83916 185 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 TROAPQ12815 778 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 SYT10Q6XYQ8 523 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 PYM1Q9BRP8 204 aaKnown RBP16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 ATP8A2Q9NTI2 1148 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 CASZ1Q86V15 1759 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 USP17L12C9JPN9 530 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 TMEM232C9JQI7 657 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 USP17L21D6R901 530 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 ZBTB22O15209 634 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 IGSF3O75054 1194 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 SPECC1LQ69YQ0 1117 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 PDILTQ8N807 584 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 COL4A1P02462 1669 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 SBK1Q52WX2 424 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 DHX58Q96C10 678 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 SRRTQ9BXP5 876 aaKnown RBP16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 TAF1P21675 1872 aa16.23■□□□□ 0.19
AP003555.1-202ENST00000511013 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 STX10O60499 249 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 PLEKHA8P1O95397 391 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 CCDC93Q567U6 631 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 GSDMAQ96QA5 445 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 INTS13Q9NVM9 706 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 ARPP21Q9UBL0 812 aaPredicted RBP16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
AP003555.1-202ENST00000511013 MECOMQ03112 1051 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 TTC38Q5R3I4 469 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 RC3H1Q5TC82 1133 aaKnown RBP16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 ZNF384Q8TF68 577 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 BAG1Q99933 345 aaPredicted RBP16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 LAMB1P07942 1786 aa16.21■□□□□ 0.19
AP003555.1-202ENST00000511013 PRDM1O75626 825 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 KIF5BP33176 963 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 REXO1L1PQ8IX06 675 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 TNFRSF25Q93038 417 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 SHISA4Q96DD7 197 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 PAGE5Q96GU1 130 aa16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 DCP1AQ9NPI6 582 aaPredicted RBP16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.21■□□□□ 0.18
AP003555.1-202ENST00000511013 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 KCNQ2O43526 872 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 CALML3P27482 149 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 NR1I3Q14994 352 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 EPSTI1Q96J88 318 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 CTAGE1Q96RT6 745 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
AP003555.1-202ENST00000511013 MAST2Q6P0Q8 1798 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 A0A1B0GTH6 734 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 SCG2P13521 617 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 NLRP5P59047 1200 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 ZNF174Q15697 407 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 TRIM65Q6PJ69 517 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 TMEM139Q8IV31 216 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 GTPBP4Q9BZE4 634 aaKnown RBP16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 PPP2R2CQ9Y2T4 447 aa16.19■□□□□ 0.18
AP003555.1-202ENST00000511013 hCG_1642624A0A1W2PR95 340 aa16.18■□□□□ 0.18
AP003555.1-202ENST00000511013 AFMP43652 599 aa16.18■□□□□ 0.18
AP003555.1-202ENST00000511013 DPYDQ12882 1025 aa16.18■□□□□ 0.18
AP003555.1-202ENST00000511013 ELF2Q15723 593 aa16.18■□□□□ 0.18
AP003555.1-202ENST00000511013 PFKFB3Q16875 520 aaPredicted RBP16.18■□□□□ 0.18
AP003555.1-202ENST00000511013 FILIP1LQ4L180 1135 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms