RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CTSHP09668 335 aa11.9□□□□□ -0.5
USP53-206ENST00000510737 ZNF746Q6NUN9 644 aaPredicted RBP11.9□□□□□ -0.5
USP53-206ENST00000510737 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.5
USP53-206ENST00000510737 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
USP53-206ENST00000510737 PARP2Q9UGN5 583 aa11.9□□□□□ -0.5
USP53-206ENST00000510737 ESR1P03372 595 aa11.89□□□□□ -0.51
USP53-206ENST00000510737 LMNB1P20700 586 aa11.89□□□□□ -0.51
USP53-206ENST00000510737 FAM53CQ9NYF3 392 aa11.89□□□□□ -0.51
USP53-206ENST00000510737 CORINQ9Y5Q5 1042 aa11.89□□□□□ -0.51
USP53-206ENST00000510737 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 KIR3DL1P43629 444 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 RPL6Q02878 288 aaKnown RBP11.88□□□□□ -0.51
USP53-206ENST00000510737 PKN1Q16512 942 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 SLC6A19Q695T7 634 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
USP53-206ENST00000510737 PPP1R13LQ8WUF5 828 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
USP53-206ENST00000510737 SLC38A3Q99624 504 aa11.88□□□□□ -0.51
USP53-206ENST00000510737 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 F6X3S4 739 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 TSNAXIP1Q2TAA8 658 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 RALGPS1Q5JS13 557 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 SND1Q7KZF4 910 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP53-206ENST00000510737 PHC3Q8NDX5 983 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 ALPK1Q96QP1 1244 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 SLAMF8Q9P0V8 285 aa11.87□□□□□ -0.51
USP53-206ENST00000510737 DAB2P98082 770 aa11.86□□□□□ -0.51
USP53-206ENST00000510737 DUSP15Q9H1R2 295 aaPredicted RBP11.86□□□□□ -0.51
USP53-206ENST00000510737 KCNK12Q9HB15 430 aa11.86□□□□□ -0.51
USP53-206ENST00000510737 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 UPK3BL1B0FP48 263 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 UPK3BL2E5RIL1 263 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 KRT1P04264 644 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 CYP7A1P22680 504 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 ERVFC1P60507 584 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 DNAJC14Q6Y2X3 702 aaPredicted RBP11.85□□□□□ -0.51
USP53-206ENST00000510737 COX4I2Q96KJ9 171 aa11.85□□□□□ -0.51
USP53-206ENST00000510737 TAF1CQ15572 869 aaPredicted RBP11.84□□□□□ -0.51
USP53-206ENST00000510737 BNC2Q6ZN30 1099 aaPredicted RBP11.84□□□□□ -0.51
USP53-206ENST00000510737 BHLHE22Q8NFJ8 381 aaPredicted RBP11.84□□□□□ -0.51
USP53-206ENST00000510737 ADAM30Q9UKF2 790 aa11.84□□□□□ -0.51
USP53-206ENST00000510737 PIWIL2Q8TC59 973 aaKnown RBP11.83□□□□□ -0.52
USP53-206ENST00000510737 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
USP53-206ENST00000510737 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.52
USP53-206ENST00000510737 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
USP53-206ENST00000510737 ST13P50502 369 aaKnown RBP11.82□□□□□ -0.52
USP53-206ENST00000510737 MPZL3Q6UWV2 235 aa11.82□□□□□ -0.52
USP53-206ENST00000510737 TTC6Q86TZ1 520 aa11.82□□□□□ -0.52
USP53-206ENST00000510737 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 FAM221AA4D161 298 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 PDE4BQ07343 736 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 PSMD2Q13200 908 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 GAB4Q2WGN9 574 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
USP53-206ENST00000510737 CILPO75339 1184 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 SRFP11831 508 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 ETV3P41162 512 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 TAGLNQ01995 201 aaKnown RBP11.8□□□□□ -0.52
USP53-206ENST00000510737 SYDE1Q6ZW31 735 aaPredicted RBP11.8□□□□□ -0.52
USP53-206ENST00000510737 TMPRSS7Q7RTY8 843 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 ADAMTS10Q9H324 1103 aa11.8□□□□□ -0.52
USP53-206ENST00000510737 TSPAN15O95858 294 aa11.79□□□□□ -0.52
USP53-206ENST00000510737 TMC4Q7Z404 712 aa11.79□□□□□ -0.52
USP53-206ENST00000510737 FBXO33Q7Z6M2 555 aa11.79□□□□□ -0.52
USP53-206ENST00000510737 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
USP53-206ENST00000510737 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
USP53-206ENST00000510737 LRRN2O75325 713 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 F13A1P00488 732 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 RLBP1P12271 317 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 PLCG1P19174 1290 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 CFPP27918 469 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 TPP2P29144 1249 aaPredicted RBP11.78□□□□□ -0.52
USP53-206ENST00000510737 RAP1GAPP47736 663 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 HK2P52789 917 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
USP53-206ENST00000510737 SP110Q9HB58 689 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
USP53-206ENST00000510737 PF4P02776 101 aa11.77□□□□□ -0.53
USP53-206ENST00000510737 CAMK2GQ13555 558 aaPredicted RBP11.77□□□□□ -0.53
USP53-206ENST00000510737 DTWD2Q8NBA8 298 aa11.77□□□□□ -0.53
USP53-206ENST00000510737 C1QTNF9P0C862 333 aa11.76□□□□□ -0.53
USP53-206ENST00000510737 TMEM201Q5SNT2 666 aa11.76□□□□□ -0.53
USP53-206ENST00000510737 CCDC84Q86UT8 332 aaPredicted RBP11.76□□□□□ -0.53
USP53-206ENST00000510737 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
USP53-206ENST00000510737 ABHD4Q8TB40 342 aa11.76□□□□□ -0.53
USP53-206ENST00000510737 RHOVQ96L33 236 aa11.76□□□□□ -0.53
USP53-206ENST00000510737 TRHRP34981 398 aaPredicted RBP11.75□□□□□ -0.53
USP53-206ENST00000510737 LMNB2Q03252 620 aa11.75□□□□□ -0.53
USP53-206ENST00000510737 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
USP53-206ENST00000510737 CCDC120Q96HB5 630 aa11.75□□□□□ -0.53
USP53-206ENST00000510737 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
USP53-206ENST00000510737 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
USP53-206ENST00000510737 DNAJA2O60884 412 aa11.74□□□□□ -0.53
USP53-206ENST00000510737 HPXP02790 462 aa11.74□□□□□ -0.53
USP53-206ENST00000510737 GATAD2BQ8WXI9 593 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms