RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	TBX21	Q9UL17	535 aa		13.55	□□□□□ -0.24
PTCD2-208	ENST00000510676	MYO15A	Q9UKN7	3530 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	ST18	O60284	1047 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	FGFR2	P21802	821 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	RRP1B	Q14684	758 aa	Known RBP	13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	MFSD5	Q6N075	450 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	NPLOC4	Q8TAT6	608 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	SLC28A3	Q9HAS3	691 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	AS3MT	Q9HBK9	375 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	RABGAP1	Q9Y3P9	1069 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	SALL1	Q9NSC2	1324 aa		13.54	□□□□□ -0.24
PTCD2-208	ENST00000510676	CACNA1H	O95180	2353 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	PQBP1	O60828	265 aa	Known RBP	13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	CNMD	O75829	334 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	LDHB	P07195	334 aa	Known RBP	13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	CCNA1	P78396	465 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	PPIG	Q13427	754 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	PAGR1	Q9BTK6	254 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	NKX2-4	Q9H2Z4	354 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	TMOD4	Q9NZQ9	345 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	YBX2	Q9Y2T7	364 aa	Known RBP	13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	MTCH2	Q9Y6C9	303 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	CACNA1B	Q00975	2339 aa		13.53	□□□□□ -0.24
PTCD2-208	ENST00000510676	FAM196B	A6NMK8	535 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	C19orf81	C9J6K1	198 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	GRM8	O00222	908 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	TRIM26	Q12899	539 aa	Predicted RBP	13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	METTL24	Q5JXM2	366 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	BEND3	Q5T5X7	828 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	MICALL1	Q8N3F8	863 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	FAM163A	Q96GL9	167 aa	Predicted RBP	13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	ZNF521	Q96K83	1311 aa		13.52	□□□□□ -0.25
PTCD2-208	ENST00000510676	SLC5A1	P13866	664 aa		13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	ZEB1	P37275	1124 aa	Predicted RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	MKRN4P	Q13434	485 aa	Predicted RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	FKBP5	Q13451	457 aa	Predicted RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	PUM3	Q15397	648 aa	Known RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	SKIV2L	Q15477	1246 aa	Known RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	LRRC24	Q50LG9	513 aa		13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	FAM47A	Q5JRC9	791 aa		13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	ANO1	Q5XXA6	986 aa		13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	CWC22	Q9HCG8	908 aa	Known RBP	13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	DMD	P11532	3685 aa		13.51	□□□□□ -0.25
PTCD2-208	ENST00000510676	ATAD5	Q96QE3	1844 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	PTPRZ1	P23471	2315 aa	Predicted RBP	13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676		A0A1W2PQ45	241 aa	Predicted RBP	13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676		A0A1W2PQY0	241 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	DCDC2C	A8MYV0	355 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	IFIT1	P09914	478 aa	Known RBP	13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	ZNF365	Q70YC5	407 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	HLA-C	Q95604	372 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	KAZALD1	Q96I82	304 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	NDUFB9	Q9Y6M9	179 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	ZNF236	Q9UL36	1845 aa		13.5	□□□□□ -0.25
PTCD2-208	ENST00000510676	CACNA1G	O43497	2377 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	ALAD	P13716	330 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	PICALM	Q13492	652 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	LBX2	Q6XYB7	198 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	IVNS1ABP	Q9Y6Y0	642 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	RIF1	Q5UIP0	2472 aa	Known RBP	13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	MYH13	Q9UKX3	1938 aa		13.49	□□□□□ -0.25
PTCD2-208	ENST00000510676	ROBO3	Q96MS0	1386 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	USP17L10	C9JJH3	530 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	ASNS	P08243	561 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	CSF2RA	P15509	400 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	RHBDL3	P58872	404 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	PPP2R2D	Q66LE6	453 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	UIMC1	Q96RL1	719 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	EMILIN3	Q9NT22	766 aa		13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	HERC5	Q9UII4	1024 aa	Known RBP	13.48	□□□□□ -0.25
PTCD2-208	ENST00000510676	MYH2	Q9UKX2	1941 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	PITPNM1	O00562	1244 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	GTPBP6	O43824	516 aa	Predicted RBP	13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	JAG1	P78504	1218 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	RABL6	Q3YEC7	729 aa	Predicted RBP	13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	RNF180	Q86T96	592 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	GJD3	Q8N144	294 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	TMEM199	Q8N511	208 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	PHOX2B	Q99453	314 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	XPNPEP3	Q9NQH7	507 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	GINM1	Q9NU53	330 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	NRBP1	Q9UHY1	535 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	PCDHA11	Q9Y5I1	949 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	CHD8	Q9HCK8	2581 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	ZFHX4	Q86UP3	3567 aa		13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.47	□□□□□ -0.25
PTCD2-208	ENST00000510676	GBF1	Q92538	1859 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	STRN	O43815	780 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	MAP4K4	O95819	1239 aa	Predicted RBP	13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	ACR	P10323	421 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	ADORA2A	P29274	412 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	TWISTNB	Q3B726	338 aa	Predicted RBP	13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	FAM178B	Q8IXR5	827 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	LPIN2	Q92539	896 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	C12orf42	Q96LP6	360 aa		13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	TSEN34	Q9BSV6	310 aa	Known RBP	13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	MTIF3	Q9H2K0	278 aa	Known RBP	13.46	□□□□□ -0.25
PTCD2-208	ENST00000510676	IL23A	Q9NPF7	189 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms