RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 BRCA2P51587 3418 aa27.63■■■□□ 2.01
SNF8-209ENST00000510558 AMOTL1Q8IY63 956 aa27.63■■■□□ 2.01
SNF8-209ENST00000510558 CYP2D7A0A087X1C5 515 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 USP17L12C9JPN9 530 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 USP17L21D6R901 530 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 UBXN2AP68543 259 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 C12orf60Q5U649 245 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 OTUD7AQ8TE49 926 aaPredicted RBP27.62■■■□□ 2.01
SNF8-209ENST00000510558 TXNRD2Q9NNW7 524 aa27.62■■■□□ 2.01
SNF8-209ENST00000510558 SMIM22K7EJ46 135 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 ERC2O15083 957 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 RNF113AO15541 343 aaKnown RBP27.61■■■□□ 2.01
SNF8-209ENST00000510558 PEX10O60683 326 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 ELNP15502 786 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 PI4K2BQ8TCG2 481 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 PXYLP1Q8TE99 480 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 GTF3C2Q8WUA4 911 aaPredicted RBP27.61■■■□□ 2.01
SNF8-209ENST00000510558 APPBP2Q92624 585 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 STRBPQ96SI9 672 aaKnown RBP27.61■■■□□ 2.01
SNF8-209ENST00000510558 PLXNB2O15031 1838 aa27.61■■■□□ 2.01
SNF8-209ENST00000510558 USP17L15C9J2P7 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L13C9JLJ4 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L11C9JVI0 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L18D6R9N7 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L22D6RA61 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L17D6RBQ6 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L19D6RCP7 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L20D6RJB6 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 ZFYP08048 801 aaPredicted RBP27.6■■■□□ 2.01
SNF8-209ENST00000510558 CCL5P13501 91 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 VCAM1P19320 739 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 USP17L24Q0WX57 530 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 TMEM179Q6ZVK1 233 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 GPRC5AQ8NFJ5 357 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 OSBP2Q969R2 916 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 RBPJLQ9UBG7 517 aa27.6■■■□□ 2.01
SNF8-209ENST00000510558 GLRX3O76003 335 aaKnown RBP27.59■■■□□ 2.01
SNF8-209ENST00000510558 PRPF38BQ5VTL8 546 aaKnown RBP27.59■■■□□ 2.01
SNF8-209ENST00000510558 CTR9Q6PD62 1173 aa27.59■■■□□ 2.01
SNF8-209ENST00000510558 AKR1B1P15121 316 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 MX1P20591 662 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 CDK8P49336 464 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 ERVK-9P63128 1117 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 ERVK-24P63145 666 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 CATSPERGQ6ZRH7 1159 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 C16orf86Q6ZW13 317 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 PAGR1Q9BTK6 254 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 RNF208Q9H0X6 261 aa27.58■■■□□ 2.01
SNF8-209ENST00000510558 ZBTB47Q9UFB7 747 aaPredicted RBP27.58■■■□□ 2.01
SNF8-209ENST00000510558 A0A1W2PRG0 241 aa27.57■■■□□ 2
SNF8-209ENST00000510558 INHAP05111 366 aa27.57■■■□□ 2
SNF8-209ENST00000510558 HDAC1Q13547 482 aaPredicted RBP27.57■■■□□ 2
SNF8-209ENST00000510558 LRRFIP1Q32MZ4 808 aaKnown RBP27.57■■■□□ 2
SNF8-209ENST00000510558 ANKRD45Q5TZF3 282 aa27.57■■■□□ 2
SNF8-209ENST00000510558 POTEEQ6S8J3 1075 aa27.57■■■□□ 2
SNF8-209ENST00000510558 ARPP21Q9UBL0 812 aaPredicted RBP27.57■■■□□ 2
SNF8-209ENST00000510558 GJD2Q9UKL4 321 aa27.57■■■□□ 2
SNF8-209ENST00000510558 GSG1L2A8MUP6 293 aa27.56■■■□□ 2
SNF8-209ENST00000510558 GJB1P08034 283 aa27.56■■■□□ 2
SNF8-209ENST00000510558 GCC1Q96CN9 775 aa27.56■■■□□ 2
SNF8-209ENST00000510558 SHISA4Q96DD7 197 aa27.56■■■□□ 2
SNF8-209ENST00000510558 CCDC17Q96LX7 622 aa27.56■■■□□ 2
SNF8-209ENST00000510558 UNC93B1Q9H1C4 597 aa27.56■■■□□ 2
SNF8-209ENST00000510558 RPAP3Q9H6T3 665 aaPredicted RBP27.56■■■□□ 2
SNF8-209ENST00000510558 SALL3Q9BXA9 1300 aa27.56■■■□□ 2
SNF8-209ENST00000510558 GPAA1O43292 621 aa27.55■■■□□ 2
SNF8-209ENST00000510558 Q3C1V9 767 aa27.55■■■□□ 2
SNF8-209ENST00000510558 NKX2-3Q8TAU0 364 aa27.55■■■□□ 2
SNF8-209ENST00000510558 MKI67P46013 3256 aaKnown RBP27.54■■■□□ 2
SNF8-209ENST00000510558 M0R2C6 588 aa27.54■■■□□ 2
SNF8-209ENST00000510558 MAPK4P31152 587 aa27.54■■■□□ 2
SNF8-209ENST00000510558 GJA8P48165 433 aa27.54■■■□□ 2
SNF8-209ENST00000510558 ICA1Q05084 483 aa27.54■■■□□ 2
SNF8-209ENST00000510558 AAMPQ13685 434 aa27.54■■■□□ 2
SNF8-209ENST00000510558 SBK1Q52WX2 424 aa27.54■■■□□ 2
SNF8-209ENST00000510558 GIMAP6Q6P9H5 292 aa27.54■■■□□ 2
SNF8-209ENST00000510558 CLEC10AQ8IUN9 316 aa27.54■■■□□ 2
SNF8-209ENST00000510558 FSD1Q9BTV5 496 aa27.54■■■□□ 2
SNF8-209ENST00000510558 PORCNQ9H237 461 aa27.54■■■□□ 2
SNF8-209ENST00000510558 ARHGEF10LQ9HCE6 1279 aa27.54■■■□□ 2
SNF8-209ENST00000510558 RABGAP1Q9Y3P9 1069 aa27.54■■■□□ 2
SNF8-209ENST00000510558 RLFQ13129 1914 aa27.52■■■□□ 2
SNF8-209ENST00000510558 GREB1LQ9C091 1923 aaPredicted RBP27.52■■■□□ 2
SNF8-209ENST00000510558 CNMDO75829 334 aa27.52■■■□□ 2
SNF8-209ENST00000510558 GNAT2P19087 354 aa27.52■■■□□ 2
SNF8-209ENST00000510558 LBX2Q6XYB7 198 aa27.52■■■□□ 2
SNF8-209ENST00000510558 SIAH1Q8IUQ4 282 aa27.52■■■□□ 2
SNF8-209ENST00000510558 CCAR1Q8IX12 1150 aaKnown RBP27.52■■■□□ 2
SNF8-209ENST00000510558 EPB41L4AQ9HCS5 686 aaPredicted RBP27.52■■■□□ 2
SNF8-209ENST00000510558 SPDYE16A6NNV3 312 aaPredicted RBP27.51■■□□□ 1.99
SNF8-209ENST00000510558 SOCS4Q8WXH5 440 aa27.51■■□□□ 1.99
SNF8-209ENST00000510558 NUDT12Q9BQG2 462 aa27.51■■□□□ 1.99
SNF8-209ENST00000510558 SH2D4AQ9H788 454 aa27.51■■□□□ 1.99
SNF8-209ENST00000510558 TMX2Q9Y320 296 aa27.51■■□□□ 1.99
SNF8-209ENST00000510558 ROBO3Q96MS0 1386 aa27.5■■□□□ 1.99
SNF8-209ENST00000510558 MINDY4BA8MYZ0 360 aa27.5■■□□□ 1.99
SNF8-209ENST00000510558 HMGCRP04035 888 aa27.5■■□□□ 1.99
SNF8-209ENST00000510558 KIAA1755Q5JYT7 1200 aa27.5■■□□□ 1.99
SNF8-209ENST00000510558 GPR142Q7Z601 462 aa27.5■■□□□ 1.99
SNF8-209ENST00000510558 U2AF1L4Q8WU68 220 aaKnown RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms