RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	DCTPP1	Q9H773	170 aa		32.18	■■■□□ 2.74
SNF8-208	ENST00000510195	SWAP70	Q9UH65	585 aa		32.18	■■■□□ 2.74
SNF8-208	ENST00000510195	MAPK4	P31152	587 aa		32.17	■■■□□ 2.74
SNF8-208	ENST00000510195	UBE2Q1	Q7Z7E8	422 aa		32.17	■■■□□ 2.74
SNF8-208	ENST00000510195	ARMT1	Q9H993	441 aa		32.17	■■■□□ 2.74
SNF8-208	ENST00000510195	TXNRD2	Q9NNW7	524 aa		32.17	■■■□□ 2.74
SNF8-208	ENST00000510195	PAK6	Q9NQU5	681 aa	Predicted RBP	32.17	■■■□□ 2.74
SNF8-208	ENST00000510195	ERVK-9	P63128	1117 aa		32.16	■■■□□ 2.74
SNF8-208	ENST00000510195	ERVK-24	P63145	666 aa		32.16	■■■□□ 2.74
SNF8-208	ENST00000510195	HMGCR	P04035	888 aa		32.15	■■■□□ 2.74
SNF8-208	ENST00000510195	SOCS4	Q8WXH5	440 aa		32.15	■■■□□ 2.74
SNF8-208	ENST00000510195	ECHDC1	Q9NTX5	307 aa		32.15	■■■□□ 2.74
SNF8-208	ENST00000510195	RABGAP1	Q9Y3P9	1069 aa		32.15	■■■□□ 2.74
SNF8-208	ENST00000510195	MBD4	O95243	580 aa		32.14	■■■□□ 2.74
SNF8-208	ENST00000510195	GUCY1A2	P33402	732 aa		32.14	■■■□□ 2.74
SNF8-208	ENST00000510195	CATSPERG	Q6ZRH7	1159 aa		32.14	■■■□□ 2.74
SNF8-208	ENST00000510195	NUDT12	Q9BQG2	462 aa		32.14	■■■□□ 2.74
SNF8-208	ENST00000510195	SMARCA5	O60264	1052 aa	Predicted RBP	32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	XRCC5	P13010	732 aa	Known RBP	32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	ZYX	Q15942	572 aa	Known RBP	32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	LBX2	Q6XYB7	198 aa		32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	AMOTL1	Q8IY63	956 aa		32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	ACER1	Q8TDN7	264 aa		32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	DDRGK1	Q96HY6	314 aa		32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	HTATIP2	Q9BUP3	242 aa		32.13	■■■□□ 2.73
SNF8-208	ENST00000510195	VCAM1	P19320	739 aa		32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	SEPT2	Q15019	361 aa		32.12	■■■□□ 2.73
SNF8-208	ENST00000510195		Q3C1V9	767 aa		32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	CCAR1	Q8IX12	1150 aa	Known RBP	32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	TRMT44	Q8IYL2	757 aa	Known RBP	32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	GPATCH3	Q96I76	525 aa		32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	MYH7	P12883	1935 aa		32.12	■■■□□ 2.73
SNF8-208	ENST00000510195	CEP290	O15078	2479 aa		32.11	■■■□□ 2.73
SNF8-208	ENST00000510195	TMEM179	Q6ZVK1	233 aa		32.11	■■■□□ 2.73
SNF8-208	ENST00000510195	DEFB118	Q96PH6	123 aa		32.11	■■■□□ 2.73
SNF8-208	ENST00000510195	CRISPLD2	Q9H0B8	497 aa		32.11	■■■□□ 2.73
SNF8-208	ENST00000510195	RPTOR	Q8N122	1335 aa		32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	MPHOSPH10	O00566	681 aa	Known RBP	32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	PRKAB2	O43741	272 aa		32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	TFRC	P02786	760 aa	Known RBP	32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	CCNA1	P78396	465 aa		32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	POTEE	Q6S8J3	1075 aa		32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	PAGR1	Q9BTK6	254 aa		32.1	■■■□□ 2.73
SNF8-208	ENST00000510195	FARP2	O94887	1054 aa	Predicted RBP	32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	SLFNL1	Q499Z3	407 aa		32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	C12orf60	Q5U649	245 aa		32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	CCDC17	Q96LX7	622 aa		32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	PLXNB2	O15031	1838 aa		32.09	■■■□□ 2.73
SNF8-208	ENST00000510195	CYP2D6	P10635	497 aa		32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	EVX2	Q03828	476 aa		32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	GPR142	Q7Z601	462 aa		32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	PLEKHH3	Q7Z736	793 aa		32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	PORCN	Q9H237	461 aa		32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	HMX1	Q9NP08	348 aa	Predicted RBP	32.08	■■■□□ 2.73
SNF8-208	ENST00000510195	PEX10	O60683	326 aa		32.07	■■■□□ 2.72
SNF8-208	ENST00000510195	HABP4	Q5JVS0	413 aa	Known RBP	32.07	■■■□□ 2.72
SNF8-208	ENST00000510195	USP6NL	Q92738	828 aa		32.07	■■■□□ 2.72
SNF8-208	ENST00000510195	DPF3	Q92784	378 aa		32.07	■■■□□ 2.72
SNF8-208	ENST00000510195	SLC4A4	Q9Y6R1	1079 aa		32.07	■■■□□ 2.72
SNF8-208	ENST00000510195	GLRX3	O76003	335 aa	Known RBP	32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	CYP2B6	P20813	491 aa		32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	MORN1	Q5T089	497 aa		32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	KBTBD3	Q8NAB2	608 aa		32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	TRIB2	Q92519	343 aa		32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	PUS7L	Q9H0K6	701 aa	Known RBP	32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.06	■■■□□ 2.72
SNF8-208	ENST00000510195	HOXC10	Q9NYD6	342 aa		32.06	■■■□□ 2.72
SNF8-208	ENST00000510195		A0A1W2PRG0	241 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	USP17L12	C9JPN9	530 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	USP17L21	D6R901	530 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	CNMD	O75829	334 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	RGS2	P41220	211 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	C16orf86	Q6ZW13	317 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	ANKLE1	Q8NAG6	615 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	SLC44A5	Q8NCS7	719 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	DYNLL2	Q96FJ2	89 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	SH2D4A	Q9H788	454 aa		32.05	■■■□□ 2.72
SNF8-208	ENST00000510195	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.04	■■■□□ 2.72
SNF8-208	ENST00000510195	CDK8	P49336	464 aa		32.04	■■■□□ 2.72
SNF8-208	ENST00000510195	MAP3K21	Q5TCX8	1036 aa		32.04	■■■□□ 2.72
SNF8-208	ENST00000510195	LPAR1	Q92633	364 aa		32.04	■■■□□ 2.72
SNF8-208	ENST00000510195	MYH8	P13535	1937 aa		32.04	■■■□□ 2.72
SNF8-208	ENST00000510195	SPDYE16	A6NNV3	312 aa	Predicted RBP	32.03	■■■□□ 2.72
SNF8-208	ENST00000510195		H0YGN5	161 aa		32.03	■■■□□ 2.72
SNF8-208	ENST00000510195	ZFY	P08048	801 aa	Predicted RBP	32.03	■■■□□ 2.72
SNF8-208	ENST00000510195	COG2	Q14746	738 aa		32.03	■■■□□ 2.72
SNF8-208	ENST00000510195	ARHGEF10L	Q9HCE6	1279 aa		32.03	■■■□□ 2.72
SNF8-208	ENST00000510195	CWC22	Q9HCG8	908 aa	Known RBP	32.03	■■■□□ 2.72
SNF8-208	ENST00000510195	CHGB	P05060	677 aa		32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	GIMAP6	Q6P9H5	292 aa		32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	CTR9	Q6PD62	1173 aa		32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	STRBP	Q96SI9	672 aa	Known RBP	32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	ARPP21	Q9UBL0	812 aa	Predicted RBP	32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	TMX2	Q9Y320	296 aa		32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	NR2E3	Q9Y5X4	410 aa		32.02	■■■□□ 2.72
SNF8-208	ENST00000510195	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.01	■■■□□ 2.71
SNF8-208	ENST00000510195	APBA2	Q99767	749 aa		32.01	■■■□□ 2.71
SNF8-208	ENST00000510195	TTC41P	Q6P2S7	1318 aa		32	■■■□□ 2.71
SNF8-208	ENST00000510195	AKR1B1	P15121	316 aa		32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms