RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MTX1Q13505 466 aa12.65□□□□□ -0.38
MBD4-208ENST00000509828 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
MBD4-208ENST00000509828 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.38
MBD4-208ENST00000509828 LPAR1Q92633 364 aa12.65□□□□□ -0.38
MBD4-208ENST00000509828 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
MBD4-208ENST00000509828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
MBD4-208ENST00000509828 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 DNM1LO00429 736 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
MBD4-208ENST00000509828 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
MBD4-208ENST00000509828 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
MBD4-208ENST00000509828 CATSPERGQ6ZRH7 1159 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
MBD4-208ENST00000509828 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 SLC5A4Q9NY91 659 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 FLRT1Q9NZU1 646 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
MBD4-208ENST00000509828 SHHQ15465 462 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 ADGRA1Q86SQ6 560 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
MBD4-208ENST00000509828 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 MAFAQ8NHW3 353 aaPredicted RBP12.63□□□□□ -0.39
MBD4-208ENST00000509828 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
MBD4-208ENST00000509828 DBNDD2Q9BQY9 259 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 RPAP3Q9H6T3 665 aaPredicted RBP12.63□□□□□ -0.39
MBD4-208ENST00000509828 SERPINB13Q9UIV8 391 aa12.63□□□□□ -0.39
MBD4-208ENST00000509828 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 CNMDO75829 334 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 ZAP70P43403 619 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 PLS1Q14651 629 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
MBD4-208ENST00000509828 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 BADQ92934 168 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
MBD4-208ENST00000509828 STRNO43815 780 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 IGSF3O75054 1194 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 HOXC6P09630 235 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 FOSL2P15408 326 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 VCAM1P19320 739 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 GRB14Q14449 540 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
MBD4-208ENST00000509828 BTBD7Q9P203 1132 aa12.61□□□□□ -0.39
MBD4-208ENST00000509828 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 COL6A3P12111 3177 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 ADORA2AP29274 412 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 COG2Q14746 738 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 MYLIPQ8WY64 445 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
MBD4-208ENST00000509828 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
MBD4-208ENST00000509828 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
MBD4-208ENST00000509828 CYBAP13498 195 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 TRMT2AQ8IZ69 625 aaKnown RBP12.59□□□□□ -0.39
MBD4-208ENST00000509828 TRPV1Q8NER1 839 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 MOV10L1Q9BXT6 1211 aaKnown RBP12.59□□□□□ -0.39
MBD4-208ENST00000509828 CCDC8Q9H0W5 538 aaPredicted RBP12.59□□□□□ -0.39
MBD4-208ENST00000509828 EHD4Q9H223 541 aa12.59□□□□□ -0.39
MBD4-208ENST00000509828 SEPT4O43236 478 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 BCAR3O75815 825 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 ERCC3P19447 782 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
MBD4-208ENST00000509828 SEPT2Q15019 361 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
MBD4-208ENST00000509828 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
MBD4-208ENST00000509828 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
MBD4-208ENST00000509828 FCER1AP12319 257 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 RAG1P15918 1043 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 ATP8B2P98198 1209 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 TLE2Q04725 743 aa12.57□□□□□ -0.4
MBD4-208ENST00000509828 SHCBP1Q8NEM2 672 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms