RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 TAF1CQ15572 869 aaPredicted RBP23.99■■□□□ 1.43
HOXC6-204ENST00000509328 GPAT2Q6NUI2 795 aa23.99■■□□□ 1.43
HOXC6-204ENST00000509328 PDHXO00330 501 aa23.98■■□□□ 1.43
HOXC6-204ENST00000509328 SGSM2O43147 1006 aa23.98■■□□□ 1.43
HOXC6-204ENST00000509328 ZNF444Q8N0Y2 327 aaPredicted RBP23.98■■□□□ 1.43
HOXC6-204ENST00000509328 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
HOXC6-204ENST00000509328 SLC45A1Q9Y2W3 748 aa23.98■■□□□ 1.43
HOXC6-204ENST00000509328 PRDM1O75626 825 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 CRHR2Q13324 411 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 NOM1Q5C9Z4 860 aaKnown RBP23.97■■□□□ 1.43
HOXC6-204ENST00000509328 FEZ1Q99689 392 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 ZFYVE28Q9HCC9 887 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 TMOD4Q9NZQ9 345 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 AGTPBP1Q9UPW5 1226 aa23.97■■□□□ 1.43
HOXC6-204ENST00000509328 USP17L2Q6R6M4 530 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 KIAA1683Q9H0B3 1180 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 R3HDMLQ9H3Y0 253 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 KANSL2Q9H9L4 492 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 CTNNA3Q9UI47 895 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.96■■□□□ 1.431e-7■■■■□ 24.6
HOXC6-204ENST00000509328 MYH4Q9Y623 1939 aa23.96■■□□□ 1.43
HOXC6-204ENST00000509328 USP14P54578 494 aa23.95■■□□□ 1.42
HOXC6-204ENST00000509328 ICA1Q05084 483 aa23.95■■□□□ 1.42
HOXC6-204ENST00000509328 ARHGEF10LQ9HCE6 1279 aa23.95■■□□□ 1.42
HOXC6-204ENST00000509328 ZNF213O14771 459 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 ORC4O43929 436 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 FGRP09769 529 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 HAND2P61296 217 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 DGKZQ13574 1117 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 TREML2Q5T2D2 321 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 PARK7Q99497 189 aaKnown RBP23.94■■□□□ 1.42
HOXC6-204ENST00000509328 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.94■■□□□ 1.42
HOXC6-204ENST00000509328 EMILIN3Q9NT22 766 aa23.94■■□□□ 1.42
HOXC6-204ENST00000509328 PLIN4Q96Q06 1357 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 GPR25O00155 361 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 CDC45O75419 566 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 PCP11498 1178 aaKnown RBP23.93■■□□□ 1.42
HOXC6-204ENST00000509328 PABPC4Q13310 644 aaKnown RBP eCLIP23.93■■□□□ 1.42
HOXC6-204ENST00000509328 CASC1Q6TDU7 716 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 CLEC10AQ8IUN9 316 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 SIAH1Q8IUQ4 282 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 C12orf42Q96LP6 360 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 ESYT1Q9BSJ8 1104 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 SH2D4AQ9H788 454 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 TACC3Q9Y6A5 838 aa23.93■■□□□ 1.42
HOXC6-204ENST00000509328 A0A1W2PRG0 241 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 TLR2O60603 784 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 TSPY3P0CV98 308 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 TSPY8P0CW00 308 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 TFAP4Q01664 338 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 PTH1RQ03431 593 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 ZYXQ15942 572 aaKnown RBP23.92■■□□□ 1.42
HOXC6-204ENST00000509328 IMMTQ16891 758 aaKnown RBP23.92■■□□□ 1.42
HOXC6-204ENST00000509328 AKNAD1Q5T1N1 836 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 NEDD1Q8NHV4 660 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 NBPF3Q9H094 633 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 INCENPQ9NQS7 918 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 PNMA3Q9UL41 463 aa23.92■■□□□ 1.42
HOXC6-204ENST00000509328 IGKV6D-41A0A0C4DH26 115 aa23.91■■□□□ 1.42
HOXC6-204ENST00000509328 EEF2P13639 858 aaKnown RBP23.91■■□□□ 1.42
HOXC6-204ENST00000509328 FAM47AQ5JRC9 791 aa23.91■■□□□ 1.42
HOXC6-204ENST00000509328 MFSD6Q6ZSS7 791 aa23.91■■□□□ 1.42
HOXC6-204ENST00000509328 STAG1Q8WVM7 1258 aa23.91■■□□□ 1.42
HOXC6-204ENST00000509328 RNF41Q9H4P4 317 aaPredicted RBP23.91■■□□□ 1.42
HOXC6-204ENST00000509328 TMX2Q9Y320 296 aa23.91■■□□□ 1.42
HOXC6-204ENST00000509328 TSPY2A6NKD2 308 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 OSBPP22059 807 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 HOXA7P31268 230 aaPredicted RBP23.9■■□□□ 1.42
HOXC6-204ENST00000509328 KIAA1211Q6ZU35 1233 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 TBC1D10CQ8IV04 446 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 ZNF296Q8WUU4 475 aaPredicted RBP23.9■■□□□ 1.42
HOXC6-204ENST00000509328 TOMM22Q9NS69 142 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 NYAP2Q9P242 653 aa23.9■■□□□ 1.42
HOXC6-204ENST00000509328 U3KPZ7 1027 aaPredicted RBP23.9■■□□□ 1.42
HOXC6-204ENST00000509328 RANBP6O60518 1105 aaKnown RBP23.89■■□□□ 1.41
HOXC6-204ENST00000509328 FKTNO75072 461 aa23.89■■□□□ 1.41
HOXC6-204ENST00000509328 CYP2C8P10632 490 aa23.89■■□□□ 1.41
HOXC6-204ENST00000509328 ATP2B2Q01814 1243 aa23.89■■□□□ 1.41
HOXC6-204ENST00000509328 ADGRA2Q96PE1 1338 aa23.88■■□□□ 1.41
HOXC6-204ENST00000509328 RRP12Q5JTH9 1297 aaKnown RBP23.88■■□□□ 1.41
HOXC6-204ENST00000509328 PPP4R3BQ5MIZ7 849 aa23.88■■□□□ 1.41
HOXC6-204ENST00000509328 MAP4K1Q92918 833 aa23.88■■□□□ 1.41
HOXC6-204ENST00000509328 CEP95Q96GE4 821 aa23.88■■□□□ 1.41
HOXC6-204ENST00000509328 MTMR4Q9NYA4 1195 aa23.88■■□□□ 1.41
HOXC6-204ENST00000509328 VCAM1P19320 739 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 NT5C2P49902 561 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 IRX3P78415 501 aaPredicted RBP23.87■■□□□ 1.41
HOXC6-204ENST00000509328 SP3Q02447 781 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 C17orf99Q6UX52 265 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 SMCR8Q8TEV9 937 aaPredicted RBP23.87■■□□□ 1.41
HOXC6-204ENST00000509328 LPAR1Q92633 364 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 ASCC2Q9H1I8 757 aaPredicted RBP23.87■■□□□ 1.41
HOXC6-204ENST00000509328 VCPKMTQ9H867 229 aa23.87■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L15C9J2P7 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L13C9JLJ4 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L11C9JVI0 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L18D6R9N7 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L22D6RA61 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L17D6RBQ6 530 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms