RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
COPS4-207ENST00000509317 TTC28Q96AY4 2481 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 CYP2E1P05181 493 aaPredicted RBP12.53□□□□□ -0.4
COPS4-207ENST00000509317 PTPREP23469 700 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 EVX2Q03828 476 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
COPS4-207ENST00000509317 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 BADQ92934 168 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 DBNDD2Q9BQY9 259 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
COPS4-207ENST00000509317 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
COPS4-207ENST00000509317 MAST2Q6P0Q8 1798 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 BAG3O95817 575 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 VCAM1P19320 739 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 PPP4CP60510 307 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 MTX1Q13505 466 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 LPAR1Q92633 364 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.41
COPS4-207ENST00000509317 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 DNM1LO00429 736 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 CYBAP13498 195 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 ZAP70P43403 619 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPS4-207ENST00000509317 GRB14Q14449 540 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 TLR7Q9NYK1 1049 aaKnown RBP12.51□□□□□ -0.41
COPS4-207ENST00000509317 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
COPS4-207ENST00000509317 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
COPS4-207ENST00000509317 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 GNAI3P08754 354 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 PLCG2P16885 1265 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 CYP7A1P22680 504 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 ITGB8P26012 769 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 EPHB4P54760 987 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 CCNA1P78396 465 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
COPS4-207ENST00000509317 SLC39A5Q6ZMH5 540 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
COPS4-207ENST00000509317 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
COPS4-207ENST00000509317 C12orf42Q96LP6 360 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
COPS4-207ENST00000509317 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
COPS4-207ENST00000509317 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 COBLO75128 1261 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
COPS4-207ENST00000509317 IGHA2P01877 340 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 HOXC6P09630 235 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 ADORA2AP29274 412 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 GUCY1A2P33402 732 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
COPS4-207ENST00000509317 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 GTF3C2Q8WUA4 911 aaPredicted RBP12.49□□□□□ -0.41
COPS4-207ENST00000509317 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
COPS4-207ENST00000509317 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 RAPGEFL1Q9UHV5 662 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
COPS4-207ENST00000509317 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
COPS4-207ENST00000509317 FOSL2P15408 326 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 USP5P45974 858 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 PLCD1P51178 756 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 KIAA1755Q5JYT7 1200 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 TATDN1Q6P1N9 297 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
COPS4-207ENST00000509317 DPP9Q86TI2 863 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
COPS4-207ENST00000509317 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 MSCO60682 206 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 GNAI2P04899 355 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 SHMT1P34896 483 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 TLE2Q04725 743 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 SEPT2Q15019 361 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms