RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CYP2D7A0A087X1C5 515 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 GSTO1P78417 241 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 AAMPQ13685 434 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 TTLL12Q14166 644 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 NOL9Q5SY16 702 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 SLC9C2Q5TAH2 1124 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 METTL16Q86W50 562 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 CHD1LQ86WJ1 897 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 KBTBD3Q8NAB2 608 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 PTPN18Q99952 460 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 TMOD2Q9NZR1 351 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
TOPBP1-207ENST00000509162 LAMA4Q16363 1823 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 A0A0D9SFI3 127 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 TNNI2P48788 182 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 PLCD1P51178 756 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 GABPAQ06546 454 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 NOGQ13253 232 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 CCDC129Q6ZRS4 1044 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 ARMC9Q7Z3E5 817 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 SLC44A5Q8NCS7 719 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 OPTNQ96CV9 577 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 PALD1Q9ULE6 856 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 AK9Q5TCS8 1911 aa8.73□□□□□ -1.01
TOPBP1-207ENST00000509162 MAGEB6P1A0A0J9YX57 407 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 GLRX3O76003 335 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 LDHCP07864 332 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 SHMT1P34896 483 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 NF2P35240 595 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 ECE1P42892 770 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 PTGDRQ13258 359 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 TTF1Q15361 905 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 UBE3CQ15386 1083 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 SUPT20HL1Q3ZLR7 823 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 ZNF589Q86UQ0 364 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 CLEC10AQ8IUN9 316 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 ANKRD13AQ8IZ07 590 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 FAM227BQ96M60 508 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 OSBPL3Q9H4L5 887 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 DCP1AQ9NPI6 582 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 ADGRA2Q96PE1 1338 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 ROBO3Q96MS0 1386 aa8.72□□□□□ -1.01
TOPBP1-207ENST00000509162 A0A0G2JMZ2 1700 aa8.71□□□□□ -1.01
TOPBP1-207ENST00000509162 GPAA1O43292 621 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 IGSF3O75054 1194 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 GDF11O95390 407 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 MAP2K2P36507 400 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 IREB2P48200 963 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 COL13A1Q5TAT6 717 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 SCYL3Q8IZE3 742 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 FAM43AQ8N2R8 423 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 APPBP2Q92624 585 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 STRBPQ96SI9 672 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 RNF186Q9NXI6 227 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
TOPBP1-207ENST00000509162 MYH8P13535 1937 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 GSG1L2A8MUP6 293 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 RNF113AO15541 343 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 ZBTB48P10074 688 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 COL9A1P20849 921 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 LBX1P52954 281 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 PPIL2Q13356 520 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 DYNLL2Q96FJ2 89 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 TMUB1Q9BVT8 246 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 RABGEF1Q9UJ41 708 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 RLFQ13129 1914 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 CASP8AP2Q9UKL3 1982 aa8.7□□□□□ -1.02
TOPBP1-207ENST00000509162 BAG3O95817 575 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 PTPRAP18433 802 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 TM4SF4P48230 202 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 NMIQ13287 307 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 C6orf132Q5T0Z8 1188 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 DCAF15Q66K64 600 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 FSD1Q9BTV5 496 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 EHD4Q9H223 541 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 ZBTB21Q9ULJ3 1066 aa8.69□□□□□ -1.02
TOPBP1-207ENST00000509162 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 UNCXA6NJT0 531 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 GOLGA8CPA6NN73 597 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CTGFP29279 349 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms