RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
CCSER1-208ENST00000509109 MAFBQ9Y5Q3 323 aaPredicted RBP9.47□□□□□ -0.89
CCSER1-208ENST00000509109 XDHP47989 1333 aa9.47□□□□□ -0.89
CCSER1-208ENST00000509109 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
CCSER1-208ENST00000509109 ZNF609O15014 1411 aa9.47□□□□□ -0.89
CCSER1-208ENST00000509109 COL4A1P02462 1669 aa9.46□□□□□ -0.89
CCSER1-208ENST00000509109 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 SFI1A8K8P3 1242 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 YDJCA8MPS7 323 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 ECE2O60344 883 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 FGFR3P22607 806 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 CTCFP49711 727 aaPredicted RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 GSK3AP49840 483 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 CTBSQ01459 385 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 KCNMA1Q12791 1236 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 SH3PXD2AQ5TCZ1 1133 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 TSPYL6Q8N831 410 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 NEDD1Q8NHV4 660 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 MYH16Q9H6N6 1097 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 CNOT7Q9UIV1 285 aaKnown RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 ATXN7L1Q9ULK2 861 aaPredicted RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 ZNF232Q9UNY5 417 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 WDR33Q9C0J8 1336 aaKnown RBP9.46□□□□□ -0.9
CCSER1-208ENST00000509109 FANCIQ9NVI1 1328 aa9.46□□□□□ -0.9
CCSER1-208ENST00000509109 SCN9AQ15858 1988 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 DCDC2BA2VCK2 349 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 PSMD14O00487 310 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 C2CD2LO14523 706 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 BMP4P12644 408 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 NOS2P35228 1153 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 MAP2K3P46734 347 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 FOXK2Q01167 660 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
CCSER1-208ENST00000509109 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 HHIPL1Q96JK4 782 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 ZIC5Q96T25 663 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 ENAMQ9NRM1 1142 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 ZDHHC3Q9NYG2 299 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 PGAP2Q9UHJ9 254 aa9.45□□□□□ -0.9
CCSER1-208ENST00000509109 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 TRAF5O00463 557 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 FOXN1O15353 648 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 CELF2O95319 508 aaKnown RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 RASA1P20936 1047 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 IRS1P35568 1242 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 FIGNL1Q6PIW4 674 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 UBE3BQ7Z3V4 1068 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 NLRP8Q86W28 1048 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 CAPNS2Q96L46 248 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 GLIS2Q9BZE0 524 aaPredicted RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 TSPAN10Q9H1Z9 355 aaPredicted RBP9.44□□□□□ -0.9
CCSER1-208ENST00000509109 PCDHGC4Q9Y5F7 938 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
CCSER1-208ENST00000509109 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
CCSER1-208ENST00000509109 CA12O43570 354 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 TEAD4Q15561 434 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 CWF19L2Q2TBE0 894 aaKnown RBP9.43□□□□□ -0.9
CCSER1-208ENST00000509109 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 LINS1Q8NG48 757 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 TRPM4Q8TD43 1214 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 DNAAF4Q8WXU2 420 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 DCPSQ96C86 337 aaKnown RBP9.43□□□□□ -0.9
CCSER1-208ENST00000509109 ZNF408Q9H9D4 720 aa9.43□□□□□ -0.9
CCSER1-208ENST00000509109 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
CCSER1-208ENST00000509109 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
CCSER1-208ENST00000509109 MYO3BQ8WXR4 1341 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 RNF225M0QZC1 329 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-208ENST00000509109 LGR5O75473 907 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 VIL1P09327 827 aaKnown RBP9.42□□□□□ -0.9
CCSER1-208ENST00000509109 MAP2K2P36507 400 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 GRM1Q13255 1194 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 GCKRQ14397 625 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-208ENST00000509109 CST9Q5W186 159 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 C1orf229Q6ZS94 237 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-208ENST00000509109 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 SIX5Q8N196 739 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-208ENST00000509109 MPHOSPH8Q99549 860 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 GREM2Q9H772 168 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
CCSER1-208ENST00000509109 CNTNAP5Q8WYK1 1306 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms