RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 DLK2Q6UY11 383 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 CCDC83Q8IWF9 413 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 MYL10Q9BUA6 226 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 SSC5DA1L4H1 1573 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 PFKFB2O60825 505 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 TMEM179Q6ZVK1 233 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 MICU3Q86XE3 530 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 CLEC10AQ8IUN9 316 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 ANKS1AQ92625 1134 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 GTF3C6Q969F1 213 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 NMRK2Q9NPI5 230 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 MTMR4Q9NYA4 1195 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 ZBTB43O43298 467 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 GH2P01242 217 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 RXRAP19793 462 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 JAG1P78504 1218 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 SCRN1Q12765 414 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 SUPT20HL1Q3ZLR7 823 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 SYNE3Q6ZMZ3 975 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 ZNF654Q8IZM8 581 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
SNCAIP-211ENST00000509023 PHF20L1A8MW92 1017 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 NOVP48745 357 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 SEPT2Q15019 361 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 TTLL1O95922 423 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 CAP2P40123 477 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 CATIPQ7Z7H3 387 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 GLIS2Q9BZE0 524 aaPredicted RBP17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
SNCAIP-211ENST00000509023 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 NUP133Q8WUM0 1156 aa17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 ZBTB21Q9ULJ3 1066 aa17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
SNCAIP-211ENST00000509023 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 ICA1Q05084 483 aa17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 CDCA5Q96FF9 252 aa17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 INTS4Q96HW7 963 aaKnown RBP17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.37
SNCAIP-211ENST00000509023 DDAH1O94760 285 aa17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 TOP1P11387 765 aaKnown RBP17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 RCAN1P53805 252 aa17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 ATP2B2Q01814 1243 aa17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 TROAPQ12815 778 aa17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.36
SNCAIP-211ENST00000509023 NID2Q14112 1375 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 CALM1P0DP23 149 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 CALM2P0DP24 149 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 CALM3P0DP25 149 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 PRKG1Q13976 671 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 WRNIP1Q96S55 665 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 ATAD5Q96QE3 1844 aa17.32■□□□□ 0.36
SNCAIP-211ENST00000509023 CTNND1O60716 968 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 DTNBO60941 627 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 ASNSP08243 561 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 INPP5BP32019 993 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 CDC27P30260 824 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 NF2P35240 595 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 RTN1Q16799 776 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 FANCBQ8NB91 859 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 MTMR7Q9Y216 660 aa17.31■□□□□ 0.36
SNCAIP-211ENST00000509023 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-211ENST00000509023 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-211ENST00000509023 CHMP4CQ96CF2 233 aa17.3■□□□□ 0.36
SNCAIP-211ENST00000509023 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
SNCAIP-211ENST00000509023 DOCK1Q14185 1865 aa17.3■□□□□ 0.36
SNCAIP-211ENST00000509023 CPLX1O14810 134 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 PPP1R12BO60237 982 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 CTCFLQ8NI51 663 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 MKL1Q969V6 931 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 JAK2O60674 1132 aa17.29■□□□□ 0.36
SNCAIP-211ENST00000509023 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms