RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ASCC2Q9H1I8 757 aaPredicted RBP23.77■■□□□ 1.4
SFXN1-209ENST00000508290 HELLSQ9NRZ9 838 aa23.77■■□□□ 1.4
SFXN1-209ENST00000508290 DYNLL2Q96FJ2 89 aa23.76■■□□□ 1.39
SFXN1-209ENST00000508290 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
SFXN1-209ENST00000508290 SLC3A2P08195 630 aaKnown RBP23.75■■□□□ 1.39
SFXN1-209ENST00000508290 SEPT2Q15019 361 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 PLEKHM2Q8IWE5 1019 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 IFNL3Q8IZI9 196 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 SLC44A5Q8NCS7 719 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 ARHGEF10LQ9HCE6 1279 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 EMILIN3Q9NT22 766 aa23.75■■□□□ 1.39
SFXN1-209ENST00000508290 TRIM6-TRIM34B2RNG4 842 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 GUCY1A2P33402 732 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 LPAR1Q92633 364 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 ARMC5Q96C12 935 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 TRIM47Q96LD4 638 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 NAPBQ9H115 298 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 KANSL2Q9H9L4 492 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 MORF4L1Q9UBU8 362 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 SRRDQ9UH36 339 aa23.74■■□□□ 1.39
SFXN1-209ENST00000508290 CYP2D7A0A087X1C5 515 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L15C9J2P7 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L13C9JLJ4 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L11C9JVI0 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L18D6R9N7 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L22D6RA61 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L17D6RBQ6 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L19D6RCP7 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L20D6RJB6 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 RGS19P49795 217 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 EVX2Q03828 476 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 USP17L24Q0WX57 530 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 MKNK2Q9HBH9 465 aa23.73■■□□□ 1.39
SFXN1-209ENST00000508290 EPB41L4AQ9HCS5 686 aaPredicted RBP23.73■■□□□ 1.39
SFXN1-209ENST00000508290 MINDY4BA8MYZ0 360 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 HIP1O00291 1037 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 MFAP1P55081 439 aaKnown RBP23.72■■□□□ 1.39
SFXN1-209ENST00000508290 HERVK_113P62684 666 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 ICA1Q05084 483 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 ANKRD13CQ8N6S4 541 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 SEC62Q99442 399 aaKnown RBP23.72■■□□□ 1.39
SFXN1-209ENST00000508290 ARHGAP39Q9C0H5 1083 aa23.72■■□□□ 1.39
SFXN1-209ENST00000508290 BAZ2AQ9UIF9 1905 aaKnown RBP23.71■■□□□ 1.39
SFXN1-209ENST00000508290 AKR1B1P15121 316 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 VCAM1P19320 739 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 CAP1Q01518 475 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 PDE4BQ07343 736 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 SLC9C1Q4G0N8 1177 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 MCMDC2Q4G0Z9 681 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 ACER1Q8TDN7 264 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 TMX2Q9Y320 296 aa23.71■■□□□ 1.39
SFXN1-209ENST00000508290 MYPNQ86TC9 1320 aa23.7■■□□□ 1.38
SFXN1-209ENST00000508290 TNPO2O14787 897 aaKnown RBP23.7■■□□□ 1.38
SFXN1-209ENST00000508290 IRX6P78412 446 aaPredicted RBP23.7■■□□□ 1.38
SFXN1-209ENST00000508290 RILPL2Q969X0 211 aa23.7■■□□□ 1.38
SFXN1-209ENST00000508290 COA7Q96BR5 231 aa23.7■■□□□ 1.38
SFXN1-209ENST00000508290 PTCH2Q9Y6C5 1203 aa23.7■■□□□ 1.38
SFXN1-209ENST00000508290 ZYXQ15942 572 aaKnown RBP23.69■■□□□ 1.38
SFXN1-209ENST00000508290 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
SFXN1-209ENST00000508290 CATSPERGQ6ZRH7 1159 aa23.69■■□□□ 1.38
SFXN1-209ENST00000508290 GPRC5AQ8NFJ5 357 aa23.69■■□□□ 1.38
SFXN1-209ENST00000508290 RAET1EQ8TD07 263 aa23.69■■□□□ 1.38
SFXN1-209ENST00000508290 P2RX7Q99572 595 aaKnown RBP23.69■■□□□ 1.38
SFXN1-209ENST00000508290 ZMYM6O95789 1325 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 RASA1P20936 1047 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 CTGFP29279 349 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 ALX1Q15699 326 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 PPP4R3BQ5MIZ7 849 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 ZNF444Q8N0Y2 327 aaPredicted RBP23.68■■□□□ 1.38
SFXN1-209ENST00000508290 SYNPO2Q9UMS6 1093 aa23.68■■□□□ 1.38
SFXN1-209ENST00000508290 A0A1W2PRG0 241 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 PPARAQ07869 468 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 IRF5Q13568 498 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 HOXC10Q9NYD6 342 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 RABGAP1Q9Y3P9 1069 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 MYH8P13535 1937 aa23.67■■□□□ 1.38
SFXN1-209ENST00000508290 SDSP20132 328 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 CCNA1P78396 465 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 SLAIN1Q8ND83 568 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 ZNF333Q96JL9 665 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 RPAP3Q9H6T3 665 aaPredicted RBP23.66■■□□□ 1.38
SFXN1-209ENST00000508290 VCPKMTQ9H867 229 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 GOPCQ9HD26 462 aa23.66■■□□□ 1.38
SFXN1-209ENST00000508290 CCDC171Q6TFL3 1326 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 SMIM22K7EJ46 135 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 WDR46O15213 610 aaKnown RBP23.65■■□□□ 1.38
SFXN1-209ENST00000508290 MAPK4P31152 587 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 PRKCZQ05513 592 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 FAM227BQ96M60 508 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 DIAPH3Q9NSV4 1193 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 NYAP2Q9P242 653 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 ANAPC4Q9UJX5 808 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 PLIN4Q96Q06 1357 aa23.65■■□□□ 1.38
SFXN1-209ENST00000508290 A0A0D9SFI3 127 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 EEF2P13639 858 aaKnown RBP23.64■■□□□ 1.37
SFXN1-209ENST00000508290 GRK4P32298 578 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 ERVK-9P63128 1117 aa23.64■■□□□ 1.37
SFXN1-209ENST00000508290 ERVK-24P63145 666 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms