RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 COA7Q96BR5 231 aa13.96□□□□□ -0.17
CAST-221ENST00000508197 USP44Q9H0E7 712 aa13.96□□□□□ -0.17
CAST-221ENST00000508197 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.17
CAST-221ENST00000508197 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.17
CAST-221ENST00000508197 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.17
CAST-221ENST00000508197 EYA2O00167 538 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
CAST-221ENST00000508197 ENTPD3O75355 529 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 COPS2P61201 443 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 TDHQ8IZJ6 230 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 LPIN2Q92539 896 aa13.95□□□□□ -0.18
CAST-221ENST00000508197 RPTORQ8N122 1335 aa13.94□□□□□ -0.18
CAST-221ENST00000508197 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
CAST-221ENST00000508197 HMX1Q9NP08 348 aaPredicted RBP13.94□□□□□ -0.18
CAST-221ENST00000508197 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
CAST-221ENST00000508197 LRRFIP2Q9Y608 721 aaKnown RBP13.94□□□□□ -0.18
CAST-221ENST00000508197 GAKO14976 1311 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 PFASO15067 1338 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 SALL1Q9NSC2 1324 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
CAST-221ENST00000508197 PEX10O60683 326 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 HMGCRP04035 888 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 SLC5A1P13866 664 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
CAST-221ENST00000508197 PHKA1P46020 1223 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 RRP1BQ14684 758 aaKnown RBP13.93□□□□□ -0.18
CAST-221ENST00000508197 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 TRIB2Q92519 343 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 C11orf49Q9H6J7 331 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
CAST-221ENST00000508197 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 SPP2Q13103 211 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
CAST-221ENST00000508197 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
CAST-221ENST00000508197 UBE2OQ9C0C9 1292 aaKnown RBP13.92□□□□□ -0.18
CAST-221ENST00000508197 COL6A1P12109 1028 aa13.91□□□□□ -0.18
CAST-221ENST00000508197 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
CAST-221ENST00000508197 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
CAST-221ENST00000508197 ZNF384Q8TF68 577 aa13.91□□□□□ -0.18
CAST-221ENST00000508197 CYP2B6P20813 491 aa13.9□□□□□ -0.18
CAST-221ENST00000508197 ADORA1P30542 326 aa13.9□□□□□ -0.18
CAST-221ENST00000508197 RHBDL3P58872 404 aa13.9□□□□□ -0.18
CAST-221ENST00000508197 PICALMQ13492 652 aa13.9□□□□□ -0.18
CAST-221ENST00000508197 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CAST-221ENST00000508197 ASCC2Q9H1I8 757 aaPredicted RBP13.9□□□□□ -0.18
CAST-221ENST00000508197 UNC80Q8N2C7 3258 aa13.9□□□□□ -0.18
CAST-221ENST00000508197 ZMYND10O75800 440 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
CAST-221ENST00000508197 HMGCS2P54868 508 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 MDM2Q00987 491 aaPredicted RBP13.89□□□□□ -0.19
CAST-221ENST00000508197 ATP2B3Q16720 1220 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 LRRC26Q2I0M4 334 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 SIL1Q9H173 461 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 TXNRD2Q9NNW7 524 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 DENND2AQ9ULE3 1009 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 PTPRFP10586 1907 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 PHIPQ8WWQ0 1821 aa13.89□□□□□ -0.19
CAST-221ENST00000508197 BTDP43251 543 aa13.88□□□□□ -0.19
CAST-221ENST00000508197 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
CAST-221ENST00000508197 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
CAST-221ENST00000508197 FAM161BQ96MY7 647 aa13.88□□□□□ -0.19
CAST-221ENST00000508197 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
CAST-221ENST00000508197 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
CAST-221ENST00000508197 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
CAST-221ENST00000508197 GPR75-ASB3A0A0A6YYF3 556 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 RGS20O76081 388 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 CCND3P30281 292 aaPredicted RBP13.87□□□□□ -0.19
CAST-221ENST00000508197 TIMM10P62072 90 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 JAG1P78504 1218 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
CAST-221ENST00000508197 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 Q3C1V9 767 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
CAST-221ENST00000508197 USP6NLQ92738 828 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
CAST-221ENST00000508197 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
CAST-221ENST00000508197 VCANP13611 3396 aa13.86□□□□□ -0.19
CAST-221ENST00000508197 CIAO1O76071 339 aa13.86□□□□□ -0.19
CAST-221ENST00000508197 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
CAST-221ENST00000508197 CAP2P40123 477 aa13.86□□□□□ -0.19
CAST-221ENST00000508197 CCL14Q16627 93 aa13.86□□□□□ -0.19
CAST-221ENST00000508197 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
CAST-221ENST00000508197 RBPJLQ9UBG7 517 aa13.86□□□□□ -0.19
CAST-221ENST00000508197 PA2G4Q9UQ80 394 aaKnown RBP13.86□□□□□ -0.19
CAST-221ENST00000508197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
CAST-221ENST00000508197 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
CAST-221ENST00000508197 MECOMQ03112 1051 aa13.85□□□□□ -0.19
CAST-221ENST00000508197 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
CAST-221ENST00000508197 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
CAST-221ENST00000508197 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
CAST-221ENST00000508197 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
CAST-221ENST00000508197 DZIP1Q86YF9 867 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms