RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SMCR8Q8TEV9 937 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 PIH1D1Q9NWS0 290 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 ACTR10Q9NZ32 417 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 FKBPLQ9UIM3 349 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 CENPJQ9HC77 1338 aaPredicted RBP8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 CC2D2AQ9P2K1 1620 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 TLR5O60602 858 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 MICAL2O94851 1124 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 KCNA6P17658 529 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 DMTNQ08495 405 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 ADCY1Q08828 1119 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 OXLD1Q5BKU9 147 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 C16orf46Q6P387 395 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 BTN2A1Q7KYR7 527 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 EPM2AIP1Q7L775 607 aaPredicted RBP8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 SLC41A1Q8IVJ1 513 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 ZSWIM2Q8NEG5 633 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 RSAD2Q8WXG1 361 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 SYAP1Q96A49 352 aaPredicted RBP8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 GCC1Q96CN9 775 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 ANLNQ9NQW6 1124 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 MAN1C1Q9NR34 630 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 EPS15L1Q9UBC2 864 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 PPARGC1AQ9UBK2 798 aaKnown RBP8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 HERC5Q9UII4 1024 aaKnown RBP8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 ZMYM5Q9UJ78 669 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 PCDHB9Q9Y5E1 797 aa8.67□□□□□ -1.02
PDGFRA-206ENST00000508170 BHMG1C9JSJ3 638 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 M0R3H8 397 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 GPR39O43194 453 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 GARTP22102 1010 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 INHBEP58166 350 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 TMEM67Q5HYA8 995 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 IRGCQ6NXR0 463 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 PHC3Q8NDX5 983 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 TTC17Q96AE7 1141 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 AGAP3Q96P47 875 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 CRB3Q9BUF7 120 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 NAA15Q9BXJ9 866 aaKnown RBP8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 HELLSQ9NRZ9 838 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 SLC4A1P02730 911 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 CPEP16870 476 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 CHKAP35790 457 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 AK2P54819 239 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 SLC45A4Q5BKX6 768 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 RETSATQ6NUM9 610 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 CARNMT1Q8N4J0 409 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 RSRC1Q96IZ7 334 aaKnown RBP8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 CYP4F11Q9HBI6 524 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 PPT2Q9UMR5 302 aa8.66□□□□□ -1.02
PDGFRA-206ENST00000508170 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 EYA2O00167 538 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 RASA4O43374 803 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 SKILP12757 684 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 XPAP23025 273 aaPredicted RBP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 SMARCA1P28370 1054 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 TMF1P82094 1093 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 MRPS35P82673 323 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 GPR158Q5T848 1215 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 TEX11Q8IYF3 940 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 SPATA5Q8NB90 893 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 GTPBP4Q9BZE4 634 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 KCTD5Q9NXV2 234 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 WRNQ14191 1432 aaPredicted RBP eCLIP8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 EEA1Q15075 1411 aa8.65□□□□□ -1.02
PDGFRA-206ENST00000508170 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 STXBP3O00186 592 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 ZBTB39O15060 712 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 NCAM2O15394 837 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 HSD3B1P14060 373 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 XBP1P17861 261 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 MUTP22033 750 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 RPS6KB1P23443 525 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 HOXD10P28358 340 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 STIP1P31948 543 aaKnown RBP8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 IREB2P48200 963 aaKnown RBP8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 RCAN1P53805 252 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 ARHGAP29Q52LW3 1261 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 BRICD5Q6PL45 260 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 TMCO3Q6UWJ1 677 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 CDC37L1Q7L3B6 337 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 MYLK4Q86YV6 388 aaPredicted RBP8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 CNTD1Q8N815 330 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 COG1Q8WTW3 980 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 CLIP3Q96DZ5 547 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 CEP95Q96GE4 821 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 MYD88Q99836 296 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 KATNAL1Q9BW62 490 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms