RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 Q6ZUG5 572 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 DHX16O60231 1041 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 NECAB1Q8N987 351 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 DDX60LQ5H9U9 1706 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 POTECB2RU33 542 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 PTMSP20962 102 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 ZYXQ15942 572 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
PROM1-207ENST00000508167 EVCP57679 992 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
PROM1-207ENST00000508167 AKR1B1P15121 316 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 CPLX1O14810 134 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 GJB2P29033 226 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 EHD4Q9H223 541 aa12.83□□□□□ -0.36
PROM1-207ENST00000508167 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 TNKSO95271 1327 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 STX6O43752 255 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 NMT2O60551 498 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 F13A1P00488 732 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 RASA1P20936 1047 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 MRE11P49959 708 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 ICA1Q05084 483 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
PROM1-207ENST00000508167 SEPT2Q15019 361 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
PROM1-207ENST00000508167 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
PROM1-207ENST00000508167 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
PROM1-207ENST00000508167 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 ORC4O43929 436 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 ASNSP08243 561 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 INPP5BP32019 993 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
PROM1-207ENST00000508167 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
PROM1-207ENST00000508167 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 CYB5R4Q7L1T6 521 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 CCDC84Q86UT8 332 aaPredicted RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 RRAGDQ9NQL2 400 aaPredicted RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 SHMT1P34896 483 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 FOXD4L4Q8WXT5 416 aaPredicted RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 GDPD2Q9HCC8 539 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 RXRAP19793 462 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 SMC1BQ8NDV3 1235 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
PROM1-207ENST00000508167 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
PROM1-207ENST00000508167 ZSCAN31Q96LW9 406 aaPredicted RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 ADD1P35611 737 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 ANTXR2P58335 489 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 SCRN1Q12765 414 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 CAVIN1Q6NZI2 390 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms