RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 CDKAL1Q5VV42 579 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 NLRP10Q86W26 655 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 STAMQ92783 540 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 PAGE5Q96GU1 130 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 LCMT1Q9UIC8 334 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CDC25AP30304 524 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CCT6AP40227 531 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 KRT23Q9C075 422 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 VPS18Q9P253 973 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 PPP1R3GB7ZBB8 358 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 RNF225M0QZC1 329 aaPredicted RBP15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 ATF3P18847 181 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CEP112Q8N8E3 955 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 MSANTD4Q8NCY6 345 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 AK7Q96M32 723 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 NAA15Q9BXJ9 866 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 VPS54Q9P1Q0 977 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 RAB21Q9UL25 225 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CEP131Q9UPN4 1083 aa15.25■□□□□ 0.03
SNCAIP-209ENST00000508017 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 TDO2P48775 406 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 ERVK-24P63145 666 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 RASGRF1Q13972 1273 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 SH3RF1Q7Z6J0 888 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 FANCBQ8NB91 859 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 SHANK3Q9BYB0 1731 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 SMIM22K7EJ46 135 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 IRS4O14654 1257 aaPredicted RBP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 PRDM1O75626 825 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 USP5P45974 858 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 VSNL1P62760 191 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
SNCAIP-209ENST00000508017 WDR17Q8IZU2 1322 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 HDXQ7Z353 690 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 STAG1Q8WVM7 1258 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 ZFP91Q96JP5 570 aaPredicted RBP15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 PSD3Q9NYI0 1048 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 ASAP1Q9ULH1 1129 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 SLC20A2Q08357 652 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 MIGA1Q8NAN2 632 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
SNCAIP-209ENST00000508017 TRIM66O15016 1216 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 ARHGAP25P42331 645 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 SART3Q15020 963 aaKnown RBP15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 PUM3Q15397 648 aaKnown RBP15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 NOA1Q8NC60 698 aaKnown RBP15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 GOLGA5Q8TBA6 731 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 BLZF1Q9H2G9 400 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 FAN1Q9Y2M0 1017 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 MYH2Q9UKX2 1941 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 ERICH2A1L162 156 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 FGFR2P21802 821 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 KRT31Q15323 416 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 FILIP1LQ4L180 1135 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 CNGA4Q8IV77 575 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 VPS16Q9H269 839 aa15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 TRMT112Q9UI30 125 aaKnown RBP15.22■□□□□ 0.03
SNCAIP-209ENST00000508017 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 FECHP22830 423 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 PKN1Q16512 942 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 LPIN2Q92539 896 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 BCORQ6W2J9 1755 aa15.21■□□□□ 0.03
SNCAIP-209ENST00000508017 ARAP2Q8WZ64 1704 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 POTEB2H3BUK9 544 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 ACTN2P35609 894 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 ZNF174Q15697 407 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 NCAPH2Q6IBW4 605 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms