RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 MRPL41Q8IXM3 137 aaKnown RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 FMR1NBQ8N0W7 255 aaPredicted RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 ZNF513Q8N8E2 541 aaPredicted RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 ZBTB38Q8NAP3 1195 aaPredicted RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 RNF214Q8ND24 703 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 STAG1Q8WVM7 1258 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 ISL2Q96A47 359 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 ZNF669Q96BR6 464 aaPredicted RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 SLC6A18Q96N87 628 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 BRINP2Q9C0B6 783 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
USP53-204ENST00000507906 COL17A1Q9UMD9 1497 aaPredicted RBP5.77□□□□□ -1.49
USP53-204ENST00000507906 A0A1W2PQU0 124 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 CAPNS1P04632 268 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 ITGB2P05107 769 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 POU3F3P20264 500 aaPredicted RBP5.76□□□□□ -1.49
USP53-204ENST00000507906 PMS1P54277 932 aaKnown RBP5.76□□□□□ -1.49
USP53-204ENST00000507906 PRAMEF13Q5VWM6 474 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 PODNQ7Z5L7 613 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 HID1Q8IV36 788 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 DCAF5Q96JK2 942 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 ZNF512BQ96KM6 892 aaPredicted RBP5.76□□□□□ -1.49
USP53-204ENST00000507906 EXOC2Q96KP1 924 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 FEZ1Q99689 392 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 RUSC1Q9BVN2 902 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 ARHGEF4Q9NR80 690 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 ENAMQ9NRM1 1142 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 SUCOQ9UBS9 1254 aaKnown RBP5.76□□□□□ -1.49
USP53-204ENST00000507906 SLC12A7Q9Y666 1083 aa5.76□□□□□ -1.49
USP53-204ENST00000507906 MEGF11A6BM72 1044 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 TBX1O43435 398 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 CBFA2T2O43439 604 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 TIAF1O95411 115 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 EPHX1P07099 455 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 ADH5P11766 374 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 GRIA2P42262 883 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 SOX4Q06945 474 aaPredicted RBP5.75□□□□□ -1.49
USP53-204ENST00000507906 FAM209AQ5JX71 171 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 SLC6A19Q695T7 634 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 PHACTR4Q8IZ21 702 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 AGGF1Q8N302 714 aaeCLIP5.75□□□□□ -1.49
USP53-204ENST00000507906 DTWD1Q8N5C7 304 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 SMG8Q8ND04 991 aaKnown RBP5.75□□□□□ -1.49
USP53-204ENST00000507906 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 KISS1RQ969F8 398 aaPredicted RBP5.75□□□□□ -1.49
USP53-204ENST00000507906 CLUHP3Q96NS8 147 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 GSX1Q9H4S2 264 aaPredicted RBP5.75□□□□□ -1.49
USP53-204ENST00000507906 PICK1Q9NRD5 415 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 LRRC4BQ9NT99 713 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 FAM105AQ9NUU6 356 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
USP53-204ENST00000507906 CST3P01034 146 aaPredicted RBP5.74□□□□□ -1.49
USP53-204ENST00000507906 YARSP54577 528 aaKnown RBP5.74□□□□□ -1.49
USP53-204ENST00000507906 TCEA2Q15560 299 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 NUTM2GQ5VZR2 741 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 DCAF15Q66K64 600 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 ACAD11Q709F0 780 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
USP53-204ENST00000507906 C2CD4AQ8NCU7 369 aaPredicted RBP5.74□□□□□ -1.49
USP53-204ENST00000507906 ZSWIM2Q8NEG5 633 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 RIN3Q8TB24 985 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 FGD4Q96M96 766 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 SPOCK3Q9BQ16 436 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 SUGCTQ9HAC7 445 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 RRAGCQ9HB90 399 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 ACTL7BQ9Y614 415 aa5.74□□□□□ -1.49
USP53-204ENST00000507906 KRBA1A5PL33 1030 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 MSTNO14793 375 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 SHOXO15266 292 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 ALX3O95076 343 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 RAPGEF3O95398 923 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 ITGAVP06756 1048 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 VIL1P09327 827 aaKnown RBP5.73□□□□□ -1.49
USP53-204ENST00000507906 SV2CQ496J9 727 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 TMEM67Q5HYA8 995 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 SHISA2Q6UWI4 295 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
USP53-204ENST00000507906 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 VWCEQ96DN2 955 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 CCDC74BQ96LY2 380 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 HAUS7Q99871 368 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 PLVAPQ9BX97 442 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 KLHL25Q9H0H3 589 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 SLKQ9H2G2 1235 aaPredicted RBP5.73□□□□□ -1.49
USP53-204ENST00000507906 KLHL42Q9P2K6 505 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 ZNF451Q9Y4E5 1061 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 CNTNAP4Q9C0A0 1308 aa5.73□□□□□ -1.49
USP53-204ENST00000507906 A0A087X0B3 334 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 IGHA1P01876 353 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 IBSPP21815 317 aaPredicted RBP5.72□□□□□ -1.49
USP53-204ENST00000507906 CAP2P40123 477 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 CCNFP41002 786 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 ASPAP45381 313 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 EVA1CP58658 441 aa5.72□□□□□ -1.49
USP53-204ENST00000507906 ANAPC15P60006 121 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms