RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DPP9Q86TI2 863 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 DDX4Q9NQI0 724 aaKnown RBP9.08□□□□□ -0.96
VCAN-207ENST00000507162 IFT57Q9NWB7 429 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 YBX2Q9Y2T7 364 aaKnown RBP9.08□□□□□ -0.96
VCAN-207ENST00000507162 SEPT4O43236 478 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 ST18O60284 1047 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
VCAN-207ENST00000507162 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
VCAN-207ENST00000507162 CAP2P40123 477 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 RABGGTBP53611 331 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 BACE1P56817 501 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 RRP1BQ14684 758 aaKnown RBP9.07□□□□□ -0.96
VCAN-207ENST00000507162 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 PPP2R2DQ66LE6 453 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 SPDYE1Q8NFV5 336 aaPredicted RBP9.07□□□□□ -0.96
VCAN-207ENST00000507162 HLA-CQ95604 372 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 PTPRFP10586 1907 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 RLFQ13129 1914 aa9.07□□□□□ -0.96
VCAN-207ENST00000507162 CLSPNQ9HAW4 1339 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 TBC1D12O60347 775 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 PDE8BO95263 885 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 MYOGP15173 224 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 CSF2RAP15509 400 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 FLIIQ13045 1269 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 FAM47AQ5JRC9 791 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 KRT40Q6A162 431 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 MFSD5Q6N075 450 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 GTF3C2Q8WUA4 911 aaPredicted RBP9.06□□□□□ -0.96
VCAN-207ENST00000507162 CERS4Q9HA82 394 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 PHF24Q9UPV7 400 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 RABGAP1Q9Y3P9 1069 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 MTCH2Q9Y6C9 303 aa9.06□□□□□ -0.96
VCAN-207ENST00000507162 CACNA1BQ00975 2339 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 C19orf81C9J6K1 198 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 PGK1P00558 417 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 FGBP02675 491 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 HOXC6P09630 235 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 ALADP13716 330 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 GJD3Q8N144 294 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 TMEM199Q8N511 208 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 KCNH6Q9H252 994 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 C9orf78Q9NZ63 289 aaPredicted RBP9.05□□□□□ -0.96
VCAN-207ENST00000507162 TRANK1O15050 2925 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 BRWD1Q9NSI6 2320 aa9.05□□□□□ -0.96
VCAN-207ENST00000507162 PHIPQ8WWQ0 1821 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 A0A1W2PQ45 241 aaPredicted RBP9.04□□□□□ -0.96
VCAN-207ENST00000507162 A0A1W2PQY0 241 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 F6X3S4 739 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 CNMDO75829 334 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 SLC5A1P13866 664 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 CALD1Q05682 793 aaKnown RBP9.04□□□□□ -0.96
VCAN-207ENST00000507162 GRB14Q14449 540 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 RNF180Q86T96 592 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 TOX2Q96NM4 488 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 PPP1R12CQ9BZL4 782 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 MTIF3Q9H2K0 278 aaKnown RBP9.04□□□□□ -0.96
VCAN-207ENST00000507162 XPNPEP3Q9NQH7 507 aa9.04□□□□□ -0.96
VCAN-207ENST00000507162 POTEMA6NI47 508 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 GRM8O00222 908 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 RARBP10826 455 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 ADORA2AP29274 412 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 BTDP43251 543 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 WDR43Q15061 677 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-207ENST00000507162 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
VCAN-207ENST00000507162 OLFML2BQ68BL8 750 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 PSRC1Q6PGN9 363 aaPredicted RBP9.03□□□□□ -0.96
VCAN-207ENST00000507162 OTOP2Q7RTS6 562 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 ANKRD33Q7Z3H0 272 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 DZIP1Q86YF9 867 aaKnown RBP9.03□□□□□ -0.96
VCAN-207ENST00000507162 STARD7Q9NQZ5 370 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 FRMPD3Q5JV73 1810 aa9.03□□□□□ -0.96
VCAN-207ENST00000507162 RIF1Q5UIP0 2472 aaKnown RBP9.03□□□□□ -0.96
VCAN-207ENST00000507162 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
VCAN-207ENST00000507162 SMCHD1A6NHR9 2005 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 A0A1B0GUL6 1792 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 COBLO75128 1261 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 JAG1P78504 1218 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
VCAN-207ENST00000507162 BEND3Q5T5X7 828 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 USP17L2Q6R6M4 530 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 NUP133Q8WUM0 1156 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 TSR2Q969E8 191 aaKnown RBP9.02□□□□□ -0.97
VCAN-207ENST00000507162 SUCLG2Q96I99 432 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 IL23AQ9NPF7 189 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 EMILIN3Q9NT22 766 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 GNL3LQ9NVN8 582 aaKnown RBP9.02□□□□□ -0.97
VCAN-207ENST00000507162 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 ABCF2Q9UG63 623 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 SLC4A7Q9Y6M7 1214 aa9.02□□□□□ -0.97
VCAN-207ENST00000507162 ZNF521Q96K83 1311 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms