RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 TTLL1O95922 423 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 RASA1P20936 1047 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 HOXA7P31268 230 aaPredicted RBP10□□□□□ -0.81
PDGFC-205ENST00000506880 INPP5BP32019 993 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 BACE1P56817 501 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 NECTIN1Q15223 517 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 USP17L2Q6R6M4 530 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 DGKHQ86XP1 1220 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 FBXL16Q8N461 479 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 ANKS1AQ92625 1134 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
PDGFC-205ENST00000506880 LSG1Q9H089 658 aaKnown RBP10□□□□□ -0.81
PDGFC-205ENST00000506880 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 PLA2G6O60733 806 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TSPY3P0CV98 308 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TSPY8P0CW00 308 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 PSMA5P28066 241 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 RCAN1P53805 252 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 ARHGEF6Q15052 776 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 PRAMEF18Q5VWM3 479 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 GMCL1P1Q8NEA9 526 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 NCOA7Q8NI08 942 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 MS4A4AQ96JQ5 239 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 MAP3K14Q99558 947 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TM6SF1Q9BZW5 370 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 ANO2Q9NQ90 1003 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TMX2Q9Y320 296 aa9.99□□□□□ -0.81
PDGFC-205ENST00000506880 TSPY2A6NKD2 308 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 IRF6O14896 467 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 GH2P01242 217 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 VEGFBP49765 207 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 ICA1Q05084 483 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 PPP2R5BQ15173 497 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 LBX2Q6XYB7 198 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 RALYLQ86SE5 291 aaKnown RBP9.98□□□□□ -0.81
PDGFC-205ENST00000506880 TEX2Q8IWB9 1127 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 MB21D1Q8N884 522 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 ZKSCAN4Q969J2 545 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-205ENST00000506880 TMEM87BQ96K49 555 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
PDGFC-205ENST00000506880 MTMR4Q9NYA4 1195 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 AGTPBP1Q9UPW5 1226 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 RBM8AQ9Y5S9 174 aaKnown RBP9.98□□□□□ -0.81
PDGFC-205ENST00000506880 ZHX2Q9Y6X8 837 aa9.98□□□□□ -0.81
PDGFC-205ENST00000506880 ERICH2A1L162 156 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 WDR46O15213 610 aaKnown RBP9.97□□□□□ -0.81
PDGFC-205ENST00000506880 GNRH1P01148 92 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 CHGBP05060 677 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 CYP21A2P08686 494 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 MCM5P33992 734 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 HSPA4P34932 840 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 COPB2P35606 906 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 GCLCP48506 637 aaPredicted RBP9.97□□□□□ -0.81
PDGFC-205ENST00000506880 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 PARK7Q99497 189 aaKnown RBP9.97□□□□□ -0.81
PDGFC-205ENST00000506880 ELP3Q9H9T3 547 aa9.97□□□□□ -0.81
PDGFC-205ENST00000506880 TOP1P11387 765 aaKnown RBP9.96□□□□□ -0.82
PDGFC-205ENST00000506880 LIFRP42702 1097 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 TFAP4Q01664 338 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 PTH1RQ03431 593 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDGFC-205ENST00000506880 TRAF1Q13077 416 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 GPATCH4Q5T3I0 446 aaKnown RBP9.96□□□□□ -0.82
PDGFC-205ENST00000506880 CREB3L3Q68CJ9 461 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 CYP4F22Q6NT55 531 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 CLMNQ96JQ2 1002 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 VCPKMTQ9H867 229 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 HOXC10Q9NYD6 342 aa9.96□□□□□ -0.82
PDGFC-205ENST00000506880 CCL15-CCL14A0A0B4J2E2 113 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L15C9J2P7 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L13C9JLJ4 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L11C9JVI0 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L18D6R9N7 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L22D6RA61 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L17D6RBQ6 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L19D6RCP7 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 USP17L20D6RJB6 530 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 E7EWF7 191 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
PDGFC-205ENST00000506880 SLC27A2O14975 620 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
PDGFC-205ENST00000506880 CALM1P0DP23 149 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 CALM2P0DP24 149 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 CALM3P0DP25 149 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 CYP2D6P10635 497 aa9.95□□□□□ -0.82
PDGFC-205ENST00000506880 AKR1B1P15121 316 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms