RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 GH2P01242 217 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 COL6A1P12109 1028 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 CCNA1P78396 465 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 CACNB2Q08289 660 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 MAP3K12Q12852 859 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 C7orf61Q8IZ16 206 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 EAF2Q96CJ1 260 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 APBA2Q99767 749 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 KIAA1683Q9H0B3 1180 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 PORCNQ9H237 461 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 COL6A3P12111 3177 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 USP5P45974 858 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 LHX8Q68G74 356 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 PAGR1Q9BTK6 254 aa13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-220ENST00000506831 PFASO15067 1338 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 PEX10O60683 326 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 MAGEB6Q8N7X4 407 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 EDC3Q96F86 508 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 FEZ1Q99689 392 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 TLR7Q9NYK1 1049 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-220ENST00000506831 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 CNMDO75829 334 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 NEFLP07196 543 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 HOXC6P09630 235 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 CCL14Q16627 93 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 ABCB5Q2M3G0 1257 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 TDHQ8IZJ6 230 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
CCHCR1-220ENST00000506831 MSCO60682 206 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 VCAM1P19320 739 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 PTPREP23469 700 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 CCND3P30281 292 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 MAGEA10P43363 369 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 RIOK1Q9BRS2 568 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
CCHCR1-220ENST00000506831 SYN1P17600 705 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 SHMT1P34896 483 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 PLCD1P51178 756 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 GABPAQ06546 454 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 GRB14Q14449 540 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 SLC17A8Q8NDX2 589 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
CCHCR1-220ENST00000506831 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 STRNO43815 780 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 IGHA2P01877 340 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 AACSQ86V21 672 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 LPAR1Q92633 364 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 UBE2OQ9C0C9 1292 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
CCHCR1-220ENST00000506831 MAGEB6P1A0A0J9YX57 407 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 POLR3DP05423 398 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 ATP2B2Q01814 1243 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 COG2Q14746 738 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 LRRC26Q2I0M4 334 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 CRNKL1Q9BZJ0 848 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 FRMPD3Q5JV73 1810 aa13.69□□□□□ -0.22
CCHCR1-220ENST00000506831 SLC9C2Q5TAH2 1124 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 DEFB123Q8N688 67 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CCHCR1-220ENST00000506831 RPAP3Q9H6T3 665 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms