RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 ADD2P35612 726 aa16.66■□□□□ 0.26
SNCB-203ENST00000506696 Q3C1V9 767 aa16.66■□□□□ 0.26
SNCB-203ENST00000506696 HABP4Q5JVS0 413 aaKnown RBP16.66■□□□□ 0.26
SNCB-203ENST00000506696 UBE2Q1Q7Z7E8 422 aa16.66■□□□□ 0.26
SNCB-203ENST00000506696 PXYLP1Q8TE99 480 aa16.66■□□□□ 0.26
SNCB-203ENST00000506696 HAUS7Q99871 368 aa16.66■□□□□ 0.26
SNCB-203ENST00000506696 CNMDO75829 334 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 VCAM1P19320 739 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 ERVK-9P63128 1117 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 ERVK-24P63145 666 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 GABPAQ06546 454 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
SNCB-203ENST00000506696 TRIB2Q92519 343 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 DPF3Q92784 378 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
SNCB-203ENST00000506696 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.26
SNCB-203ENST00000506696 SGPL1O95470 568 aa16.64■□□□□ 0.25
SNCB-203ENST00000506696 HMGCRP04035 888 aa16.64■□□□□ 0.25
SNCB-203ENST00000506696 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
SNCB-203ENST00000506696 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNCB-203ENST00000506696 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
SNCB-203ENST00000506696 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
SNCB-203ENST00000506696 A0A1W2PRG0 241 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 TFRCP02786 760 aaKnown RBP16.63■□□□□ 0.25
SNCB-203ENST00000506696 CCL14Q16627 93 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 KIAA1755Q5JYT7 1200 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
SNCB-203ENST00000506696 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
SNCB-203ENST00000506696 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 PCDH10Q9P2E7 1040 aa16.63■□□□□ 0.25
SNCB-203ENST00000506696 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 AKR1B1P15121 316 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 WDR78Q5VTH9 848 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 TMED8Q6PL24 325 aaPredicted RBP16.62■□□□□ 0.25
SNCB-203ENST00000506696 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNCB-203ENST00000506696 PUS7LQ9H0K6 701 aaKnown RBP16.62■□□□□ 0.25
SNCB-203ENST00000506696 MYH7P12883 1935 aa16.62■□□□□ 0.25
SNCB-203ENST00000506696 RANBP2P49792 3224 aaKnown RBP16.61■□□□□ 0.25
SNCB-203ENST00000506696 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
SNCB-203ENST00000506696 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
SNCB-203ENST00000506696 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 CCAR1Q8IX12 1150 aaKnown RBP16.61■□□□□ 0.25
SNCB-203ENST00000506696 STK11IPQ8N1F8 1099 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 GCC1Q96CN9 775 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
SNCB-203ENST00000506696 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 SLC4A4Q9Y6R1 1079 aa16.61■□□□□ 0.25
SNCB-203ENST00000506696 SPDYE16A6NNV3 312 aaPredicted RBP16.6■□□□□ 0.25
SNCB-203ENST00000506696 USP17L12C9JPN9 530 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 USP17L21D6R901 530 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 USP14P54578 494 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 CHRDL2Q6WN34 429 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 PLEKHH3Q7Z736 793 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 OTUD7AQ8TE49 926 aaPredicted RBP16.6■□□□□ 0.25
SNCB-203ENST00000506696 PAWRQ96IZ0 340 aaKnown RBP16.6■□□□□ 0.25
SNCB-203ENST00000506696 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
SNCB-203ENST00000506696 MYH8P13535 1937 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
SNCB-203ENST00000506696 MAPK4P31152 587 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
SNCB-203ENST00000506696 MORN1Q5T089 497 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 USP6NLQ92738 828 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 CRISPLD2Q9H0B8 497 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
SNCB-203ENST00000506696 PCDHB15Q9Y5E8 787 aa16.59■□□□□ 0.25
SNCB-203ENST00000506696 CDK8P49336 464 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 ICA1Q05084 483 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 SIAH1Q8IUQ4 282 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 SOCS4Q8WXH5 440 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
SNCB-203ENST00000506696 RABGAP1Q9Y3P9 1069 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 ALPK3Q96L96 1907 aa16.58■□□□□ 0.24
SNCB-203ENST00000506696 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
SNCB-203ENST00000506696 RPTORQ8N122 1335 aa16.57■□□□□ 0.24
SNCB-203ENST00000506696 CCND3P30281 292 aaPredicted RBP16.57■□□□□ 0.24
SNCB-203ENST00000506696 RGS2P41220 211 aa16.57■□□□□ 0.24
SNCB-203ENST00000506696 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
SNCB-203ENST00000506696 ATP2B2Q01814 1243 aa16.57■□□□□ 0.24
SNCB-203ENST00000506696 CACNB2Q08289 660 aaPredicted RBP16.57■□□□□ 0.24
SNCB-203ENST00000506696 CTR9Q6PD62 1173 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms